Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03343 ATGCCTTCAGGTGGGGCAGTGGCTTATCACAATATGAGCCCCTCCGTCTTCCTCCTTTTCCTTTTTGTCACTGTCCCTTTCCTTCCCCATTCTGCCCTCTCTAACCCTCTAGggttttttctaaattgtggGGGAACCAATGAGGTAACGGTAGACAGTCTAAAATACATTCCTGATGGAAGCTACACAAAGGTTGGAACTGTTGCAACCATTAACAAAACAGACTTATTGCCAACACTTACCACATTGCGTTACTTTCCCAACACGTCATCTAGAAAGTTTTGCTATACATTTCCAGTTATCAAAGGAAACAAATACCTTGTGAAAACTATATACTATTATGGAGAATTTGATGGAGGGAAACAACCGCCGGTGTTCGATCAAATCATTGAAGGGACTAAATGGAGTGTTGTTAATACAACAGAAGATTATGCTAAAGGTCTTAGTTCTTACTATGAGGTTGTGGTTGTGTCTCCTGGGAAGAAATTGAGTGTTTGTTTGGCTAGGAATGAACATACTGGTAACTCAAGTCCTTTCATCTCTGCTTTGGAGGTTAAGAGTTTGGATGGTTCTTTGTATAATCCTATTGATTTTTCCAAGTATGCCCTTGTAACTGTTGCTAGGCATCATTTTGGAGGTGATGATATCATTAGTTTTCCAGATGACAAATTTAACCGGATGTGGCAACCATTTAAGGACGAAAATCCGGTTGTGATAAGCAATTCAAATATATCATCTTCAGATTTTTGGAACCTTCCTCCAGTTAAAGCAATTAGTTCAGGAATAACCACAAGTAAAGGAAAAACACTTGAAATTCAATGGCCACCAGTGTTGCTTCCAAGTTCATACTACTACATTTCTCTCTACTTTCAAGATAACAGAAATCCAAGCCCTTTTAGCTGGAGAACCTTTGATGTTGCTATCAATGGCCACACATTTTACTCAAACCTTAATGCCACATCTAAGGGTGTCACAGTTTATGCTGCACAATGGCCACTTTCTGGACAGACCAAAATTACTATGACACCTTCTGCCGATATGCCTGTTGGACCTGTTGTCAATGCTGGAGAAGTTTATCAGATTCTTCCCCTTGGCGGTCGAACTCAAACTAGAGACGTAATTGCAATGGAAGATTTGGCTAAGAGTCTTCAAAATCCGCCTCGTGATTGGAACGGTGATCCTTGCCGGCCTAAAGGGAATTCGTGGACTGGAGTTACATGCTCTGATCAATTTGTTGCACGAGTCATTGCATTGAATTTAACTAATGGTGGCATAGCTGGGACACTTCCTCCAAGTATTGGCAATTTAACTGCTCTTTCTCATCTTTGGATTGGGGGAAACAAATTCACAGGCACTATTCCTGACTTGCATGGACTGAGGGAGTTACAAACTTTGCATTTGGAGAATAACAAGTTTGAAGGATCACTTCCTCCATCCATAGAAAAACTTCCGAAACTGCAGGAGATTTCTTCTGATATGCAAAATAAAAAGTTGGATGGAAAAGCGACCAAACAACTAAAGTGA 1524 0.4016 MPSGGAVAYHNMSPSVFLLFLFVTVPFLPHSALSNPLGFFLNCGGTNEVTVDSLKYIPDGSYTKVGTVATINKTDLLPTLTTLRYFPNTSSRKFCYTFPVIKGNKYLVKTIYYYGEFDGGKQPPVFDQIIEGTKWSVVNTTEDYAKGLSSYYEVVVVSPGKKLSVCLARNEHTGNSSPFISALEVKSLDGSLYNPIDFSKYALVTVARHHFGGDDIISFPDDKFNRMWQPFKDENPVVISNSNISSSDFWNLPPVKAISSGITTSKGKTLEIQWPPVLLPSSYYYISLYFQDNRNPSPFSWRTFDVAINGHTFYSNLNATSKGVTVYAAQWPLSGQTKITMTPSADMPVGPVVNAGEVYQILPLGGRTQTRDVIAMEDLAKSLQNPPRDWNGDPCRPKGNSWTGVTCSDQFVARVIALNLTNGGIAGTLPPSIGNLTALSHLWIGGNKFTGTIPDLHGLRELQTLHLENNKFEGSLPPSIEKLPKLQEISSDMQNKKLDGKATKQLK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03343 507 SUPERFAMILY L domain-like 395 490 - -
Tsu02g03343 507 Gene3D - 37 188 - -
Tsu02g03343 507 Gene3D Ribonuclease Inhibitor 371 507 IPR032675 -
Tsu02g03343 507 Pfam Malectin-like domain 41 361 IPR024788 -
Tsu02g03343 507 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-KINASE-RELATED 16 506 - -
Tsu02g03343 507 Pfam Leucine rich repeat N-terminal domain 378 408 IPR013210 -
Tsu02g03343 507 PANTHER OS07G0107800 PROTEIN-RELATED 16 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03343 Tsu-Chr2 37420003 37423551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03343 41 500 Receptor kinase-like Gene Family AT2G37050 30.328 3.58e-53 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03343 - - cam:101498863 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03343 02 37420003 37423551 Tsu02g03343 02 37420003 37423551 ECH