Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03341 ATGGGTACTTCTCAGAGCCGCGAAGGCCGTGAATTCTCCGATTCCGACTCCGATTACGACGATGAACACGAACGCGATGTAGAGGAAGATGAACAAGATCAATACCAAGATGCTCAAACTTCTTCTCAATCCCATTCCACACAGCTAGATGAAGTTGACGCTAAACTCAGCGCCTTAAAACTCaaatattcatcttcttcttcttcaccttcacaatcacaatcacaatcaaaatcacaaccaaacacaaaaacaccTCTTCCTAAAAACGCCGTCAAACTTTACCTTCACATCGGCGGTAACACTCCCAATGCAAAATGGATCATCTCCGACAAACGCACTTTCTACGAATTCGTCAAATTCGACGAAGACGATTACGAAGATGAACAAGATCAAAACGACGTCGCTCAAGGCCAATGGATTCTCAAAATCGGTTCCAAAATTCGCGCTAGGGTTTCCACTGAACTTCAATTGAAGATGTTCGGTGATCAACGCCGTGTTGATTTCGTATCCAACGGTGTTTGGGCTCTTAAATTTCCCACCGATGAATCTTACCGGAAATTCGTTACTGAATTTCAGAACTGTACATTTGAGAATGTTTACGGTTTATCACCAACTGAAGAAAACAAGATTAAGGTTTACGGTAAGGAGTTTATCGGTTGGGTTAAGCCTGAAGCCGCCGATGATTCCGTTTGGGAAGATGCAGTTTCCGACGATGGTTCATGGAAGACACCGGAGCCTTATAAAACTAGAGGTGATTTGATGGAGGAGTTTGAAGAGGCTGCAAATGGTGGTATTCAAACCCTGACCCTAGGAGCACTTGACAACAGTTTCCTTCTCAATGATGCCGGTTTTCAGGTTTACCGGAATTTTGATCGCGGAATTCGCAAGGGTGTTGCTGTGAAATTCGAAGGGGGGAACCTTCGGAATGAGACGCCGGAGAAGGCGTTGTTGATGAGGGCAGAGACTAACATGATGCTGATGAGTCCCATGAATAGTGGAAAGCCACATGCTTCGAAGCTTCACCAGCTTGATATAGAAACTGGGAAGATTGTTACAGAGTGGAAATTTGAGAAAGATGGGGCTGATATCACAATGAGGGATATCACAAATGATACTAAAGGGTCACAATTGGATCCCTCGGAATCGACTTTCTTAGGGTTGGATGATAACAGACTCTGTCAATGGGATATGCGTGACAGAAAAGGAATTGTTCAGAATATAGCTACGGCTAGTTCTCCGGTGTTGCATTGGAACCAGGGGCATCAATTTTCAAGAGGAACTAACTTTCAGTGCTTTGCAACAACTGGAGATGGTTCAATTGTGGTGGGTTCTCTTGATGGGAAGATAAGATTGTATTCGAAGACATCGATGAGGATGGCTAAGACTGCTTTTCCTGGGCTTGGTTCGCCTATTACAAGTGTTGATGTTACTTTTGATGGAAAGTGGGTGTTGGGTACTACCGATACTTATTTGGTGCTGATTTGTACATTGTTTACTGATAAAGATGGGAAGACAAAGACTGGTTTTGGTGGTCGTATGGGTAACAGGATCGGTGCTCCTAGATTGTTGAAGCTCACTCCTCTGGATTCACATTTGGCTGGACCTACTAATAAGTTTCATGGTGGACATTTCTCATGGGTCACTGAGAATGGTAAACAAGAACGCCACCTTGTTGCAACTGTGGGAAAGTTCAGTGTGATATGGGATTTTCAGCAGGTAAAGAACAGTGCCCATGAATGTTACAAGAATCAACAAGGACTGAAAAGCTGTTACTGTTATAAGATAGTATTGAAGGACGAGTCAATCATAGAATCGCGATTTATGCATGACAAATATGCTGTTACTGACTCCCCCGAAGCTCCGTTGGTGGTAGCAACTCCTATGAAAGTTAGCTCTATCAGCCTGTCTGGAAAACGACCCGGTTAA 1929 0.423 MGTSQSREGREFSDSDSDYDDEHERDVEEDEQDQYQDAQTSSQSHSTQLDEVDAKLSALKLKYSSSSSSPSQSQSQSKSQPNTKTPLPKNAVKLYLHIGGNTPNAKWIISDKRTFYEFVKFDEDDYEDEQDQNDVAQGQWILKIGSKIRARVSTELQLKMFGDQRRVDFVSNGVWALKFPTDESYRKFVTEFQNCTFENVYGLSPTEENKIKVYGKEFIGWVKPEAADDSVWEDAVSDDGSWKTPEPYKTRGDLMEEFEEAANGGIQTLTLGALDNSFLLNDAGFQVYRNFDRGIRKGVAVKFEGGNLRNETPEKALLMRAETNMMLMSPMNSGKPHASKLHQLDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGIVQNIATASSPVLHWNQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRMAKTAFPGLGSPITSVDVTFDGKWVLGTTDTYLVLICTLFTDKDGKTKTGFGGRMGNRIGAPRLLKLTPLDSHLAGPTNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYKNQQGLKSCYCYKIVLKDESIIESRFMHDKYAVTDSPEAPLVVATPMKVSSISLSGKRPG 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03341 642 MobiDBLite consensus disorder prediction 1 88 - -
Tsu02g03341 642 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 640 IPR040458 -
Tsu02g03341 642 MobiDBLite consensus disorder prediction 36 51 - -
Tsu02g03341 642 MobiDBLite consensus disorder prediction 17 35 - -
Tsu02g03341 642 PANTHER DEM PROTEIN 1 640 - -
Tsu02g03341 642 MobiDBLite consensus disorder prediction 60 87 - -
Tsu02g03341 642 SUPERFAMILY WD40 repeat-like 340 500 IPR036322 GO:0005515
Tsu02g03341 642 Gene3D - 336 520 IPR015943 GO:0005515
Tsu02g03341 642 Coils Coil 642 642 - -
Tsu02g03341 642 Pfam VID27 C-terminal WD40-like domain 309 583 IPR013863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03341 Tsu-Chr2 37394615 37398130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03341 1 640 Acyl Lipid Metabolism Gene Families AT3G19240 68.713 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03341 - - adu:107469745 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03341 02 37394615 37398130 Tsu02g03341 02 37394615 37398130 ECH