Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03323 atgtttggattaatcagaagaaaatcaaattggttATCTTCTTCCAATTTTCTGTTAAGAAGAGACTTGTGTTTGGGTGCTGCTCTTCCTCAAAATGGCGGAGGAGGTGGAGGAGCCATGGAACACTTGATCACTCAACTCCAATCTCATGTCCATAAGGTCCTTGCTGGTGGTGGACCCGAAGCTGTTAAAAGGAATAATAGTAGAAACAAACTTCTACCTAGACAACGAATTGATCTTCTTCTTGATCCTGGTTCTTCCTTCCTTGAGCTTTCACAgCTTGCAGGACATGAGTTGTATGAAGAGCCTTTACCTTCTGGTGGGGTTGTGACTGGCATAGGTCCGGTGCATGGCCGACTTTGCATGTTTGTGGCTAATGACCCTACTGTTAAGGGAGGGACTTATTATCCTATTACTGTTAAGAAACATCTCAGGGCACAGGAGATTGCTGCTCAATGCAAATTGCCGTGCGTGTATCTTGTTGATAGTGGCGGTGCTTTCCTTCCCAAGCAGGCTGATGTATTTCCGGACAGAGAAAACTTTGGTAGAATATTTTATAATCAGGCTATAATGTCTTCTCAGGGGATTCCCCAAATTGCATTGGTGTTAGGCTCTTGCACTGCTGGTGGTGCCTATATACCTGCTATGGCTGATGAAAGTGTAATGGTCAAGGGAAATGGCACTATTTTTTTAGCTGGGCCACCTCTTGTTAAGGCTGCCACTGGAGAAGAAGTGTCTGCAGAGGATTTGGGAGGTGCTGCTGTGCACTGCAAGACATCGGGTGTTTCTGACTATTTTGCTCAAGATGAACTTCATGCACTTTCACTTGGGAGGGACATTGTTAAGAATTTGCACATGGCTGGGAGAGATGTCTCGACAAATGGATTGCAAAATATGAATTATGAATATAAAGAGCCACTATACGATGTCAATGAACTTCGTTCTATTGCTCCCACTGATCTTAAGCAGCAGTTTGATATCCGAGAAGTAATTTCTCGCATTGTTGACGGAAGTGAATTTGATGAATTCAAGAAACTGTATGGCACTACTCTTGTAACAGGTTTTGCTAGGATTTTTGGACAGCCTGTAGGAATTATTGGAAACAATGGGattttattcaatgaatctgcaCTGAAAGGGGCCCATTTCATTGAACTATGCACTCAACGTAACATTCCTCTGGTCTTCCTTCAGAACATCACTGGATTCATGGTGGGCTCAAAATCCGAAGCAAATGGTATAGCAAAGTCTGGTGCAAAAATGGTGATGGCTGTTTCTTGTGCAAAGGTACCTAAAATCACGATAATTGTTGGCGGAAGCTTTGGTGCTGGAAACTATGCAATGTGCGGTCGTGCCTATAGTCCAAACTTCATGTTCCTTTGGCCTAATGCAAGAATATCTGTCATGGGTGGTGCTCAGGCTGCTGGTGTTCTGGCTCAAATAGAGAAAGGCAATAAGAAAAAGCAAGGAATTCAGTGGAACAAGGAGGAAGAGGAAAAGTTCAAAACGAAAGTAGTTGAGGCGTACGAGAGAGAAGGAAGTCCTTATTACTCAACGGCGAGGCTTTGGGATGACGGAATCATTGATCCAGCTGATACAAGAAAAATCATTGGTCTATGTGTCTCTGCTTCCTTGAACCGGGCCACAGAAAATACCAAATATGGCGTATTTAGAATGTGA 1680 0.4226 MFGLIRRKSNWLSSSNFLLRRDLCLGAALPQNGGGGGGAMEHLITQLQSHVHKVLAGGGPEAVKRNNSRNKLLPRQRIDLLLDPGSSFLELSQLAGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQAIMSSQGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGAAVHCKTSGVSDYFAQDELHALSLGRDIVKNLHMAGRDVSTNGLQNMNYEYKEPLYDVNELRSIAPTDLKQQFDIREVISRIVDGSEFDEFKKLYGTTLVTGFARIFGQPVGIIGNNGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSKSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLAQIEKGNKKKQGIQWNKEEEEKFKTKVVEAYEREGSPYYSTARLWDDGIIDPADTRKIIGLCVSASLNRATENTKYGVFRM 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03323 559 Pfam Carboxyl transferase domain 66 549 IPR034733 -
Tsu02g03323 559 SUPERFAMILY ClpP/crotonase 41 282 IPR029045 -
Tsu02g03323 559 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 305 551 IPR011763 GO:0016874
Tsu02g03323 559 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 40 296 IPR011762 -
Tsu02g03323 559 PANTHER ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED 39 559 IPR045190 -
Tsu02g03323 559 PANTHER BNAA03G50840D PROTEIN 39 559 - -
Tsu02g03323 559 SUPERFAMILY ClpP/crotonase 299 559 IPR029045 -
Tsu02g03323 559 Gene3D - 37 288 - -
Tsu02g03323 559 Gene3D - 299 559 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03323 39 559 Acyl Lipid Metabolism Gene Families AT4G34030 81.382 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03323 K01969 - gmx:100777651 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03323 02 37206373 37210524 Tsu02g03323 02 37206373 37210524 ECH