Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03322 ATGGCTTCCTCTTCTACTTCCCTTTCTCTCACTCCTTCTTCTCACATTcccattttctcttctttccctTCACGCCTTACTCCCTCATTTCCGGGATTCCATTCCCGAATCACCCACAAACCACTTCACCTTCAAAACCCTCTTCATCTTTCCCCCAAAATTAACTCTTTGCGTCAACATACCACAGCTACACCAGTTAACAAAGATCTGTGGGAAAAATCGATTTTGAAAAGTGAAACTCCAGTCCTTGTTGAGTTCTTTGCAAATTGGTGTGGTCCATGCAAGATGGTACACCGAGTTATTGACGAGATTGCAACAGAGTATGCTGGAAAACTCAAGTGCTTTGTACTCAACACAGACACTGATATGCAAATTGCTGATGAGTATGAAATTAAGGCTGTACCAGtggttttatttttcaaaaatgggaagaaatttgatgctgtAGTTGGTACCATGCCAAAGGAATTTTACGTGTCTGCAATTGAGAGGATGCTCGAGTCTTAA 507 0.3748 MASSSTSLSLTPSSHIPIFSSFPSRLTPSFPGFHSRITHKPLHLQNPLHLSPKINSLRQHTTATPVNKDLWEKSILKSETPVLVEFFANWCGPCKMVHRVIDEIATEYAGKLKCFVLNTDTDMQIADEYEIKAVPVVLFFKNGKKFDAVVGTMPKEFYVSAIERMLES 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03322 168 ProSitePatterns Thioredoxin family active site. 83 101 IPR017937 -
Tsu02g03322 168 PRINTS Thioredoxin family signature 82 90 - -
Tsu02g03322 168 PRINTS Thioredoxin family signature 90 99 - -
Tsu02g03322 168 PRINTS Thioredoxin family signature 130 141 - -
Tsu02g03322 168 Pfam Thioredoxin 65 162 IPR013766 -
Tsu02g03322 168 PANTHER THIOREDOXIN M3, CHLOROPLASTIC 43 167 - -
Tsu02g03322 168 SUPERFAMILY Thioredoxin-like 56 167 IPR036249 -
Tsu02g03322 168 PANTHER GEO12009P1 43 167 - -
Tsu02g03322 168 TIGRFAM thioredoxin: thioredoxin 68 164 IPR005746 GO:0015035
Tsu02g03322 168 CDD TRX_family 73 163 - -
Tsu02g03322 168 Gene3D Glutaredoxin 63 168 - -
Tsu02g03322 168 ProSiteProfiles Thioredoxin domain profile. 52 168 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03322 Tsu-Chr2 37201202 37204471 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03322 K03671 - gmx:100306680 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03322 02 37201202 37204471 Tsu02g03322 02 37201202 37204471 ECH