Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03298 atgaattcGATTCATTTGATTAACACTCTTTCACTTGGTGCTCCGCATCGATTTCTTTTACCTCAATGCGATTCTTCGCATTCTTCGTTTCGTTCTTCCGTCGTTCCAAAACGGCGGCGTTTGGCGAACTCCGGTGGATTCCGTCTCGTCTCAGCCCAAACCGTTAAATCGGTACCACGCGCGAATGGAACTTATACAGTTTCCGATTTCATGACTAAGAAGAAAAATTTGCATGTTGTTAAAATCACTACATCTGTTGATGAAGcTCTGGAGGCTCTTGTTAGTAACAGAATCAGTGGTCTTCCCGTAATCGATGACGAATGGAATCTGGTTGGAGTTGTTTCTGATTATGACTTGTTAGCAATTGATACAATATCAGGTAGCAGTGATGCAAGCTTGTTCCCTGATGTCGACAGTTCTTGGAAAACATTCAATGAGATACAAAAGCTGCTCAGTAAGACCAATGGCAAAGTTGTCGGTGACTTAATGACTCCAAGTCCACTCTTTGTTCATGAATCCACCAGTCTGGAGGATGCTGCCAGGCTGTTGCTTGAAACAAAATATCGTCGACTACCTGTGGTAGACAAAGATGGAAAGCTGGTTGGTCTTATTACAAGGGGAAATATTGTTAAGGCGGCTCTGCTGTCAAAGCGCTCTGCTGAGAGACTCACATAG 675 0.4311 MNSIHLINTLSLGAPHRFLLPQCDSSHSSFRSSVVPKRRRLANSGGFRLVSAQTVKSVPRANGTYTVSDFMTKKKNLHVVKITTSVDEALEALVSNRISGLPVIDDEWNLVGVVSDYDLLAIDTISGSSDASLFPDVDSSWKTFNEIQKLLSKTNGKVVGDLMTPSPLFVHESTSLEDAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALLSKRSAERLT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03298 224 SMART cbs_1 166 214 IPR000644 -
Tsu02g03298 224 SMART cbs_1 76 124 IPR000644 -
Tsu02g03298 224 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 51 221 - -
Tsu02g03298 224 SUPERFAMILY CBS-domain pair 62 214 IPR046342 -
Tsu02g03298 224 ProSiteProfiles CBS domain profile. 71 132 IPR000644 -
Tsu02g03298 224 ProSiteProfiles CBS domain profile. 163 221 IPR000644 -
Tsu02g03298 224 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 51 221 - -
Tsu02g03298 224 Pfam CBS domain 159 212 IPR000644 -
Tsu02g03298 224 Pfam CBS domain 67 121 IPR000644 -
Tsu02g03298 224 Gene3D - 62 220 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03298 Tsu-Chr2 36853492 36857663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03298 - - gmx:100814621 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03298 02 36853492 36857663 Tsu02g03298 02 36853492 36857663 ECH