Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03290 ATGAATACTCAATCCAATCCTTTGCACATTATCTTTTTCCCTTTCATGGGTCATGGCCATATGATACCCACCATTGCCATGGCCAAATTATTTGCTTCAAAAGGTATTAAGGCTACCATAGTCACCACACCCCTCAACAAACCTATGATCTCTAATGCCATTGAACAATCCAAAATTCATTCTAACAACAATATAGATATTCAAACCATTAAGTTCCCTTGTGTAGAAGGTGGTTTACCAGAAGGTTGTGAAAATGTTGATGCAATCCCTTCACCTCAATTGGTTCCTACATTCTTTACTGCTACTAAATTGCTACAAAAGCCTTTTGAAGAGCTTTTGCTTCAACAAAAACCACATTGTATTATTGCTGATATGTTCTTTCCATGGGCAACTGATTCTGCTGCAAAATTTGGAATTCCTAGGATTGTGTTCCATGGCATCAGTTTCTTTTCATTGTGTGCTGGTCAATGCATGAAACAATATGAGCCTCACAAGAATGTTTCTTCCGACACAGAACTATTCGAGATTCCAAATCTTCCTGGAAATATCAAGTTGACAAGGTTGCAGCTTCCTAGTATATTCACCAAAGATGATTCCATAACCAAAAACATCGCGAAACTATTCGCGGAAATTAGAGAATCTGAGGTGAAGAGTTATGGAGTTATTGTTAATAGCTTCTATGAGCTTGAAAGTGTTTATGCAGATTATTATAGAGAAGTACTTGGAACAAAAGAATGGCATATAGGTCCAATCTCAATCCACAACAGAATTAAGGAGGAAGAACTAACATCTTATCGCGGAAACGAAACATCAATTGACAAACATTATTGTCTAAAGTGGCTTGACACAAAAAAGATCAACTCAGTTGTTTACTTGTGTTTTGGAAGTACAACATCATTCCTTAACTCTCAGCTTAAGGAAATTGCTATGGGACTAGAAGCTTCAGGGCATAATTTTATTTGGGttgtgaagaaaaaatatgaagatgaagaaaaatgtaAACTTGAAAGCTTTGAGAAAAGAATGAAAGGAAAAGGACTAATTATAAGAGGTTGGTCTCCACAAAGATTGATTCTTGAACATAAAGCAATTGGTGCATTTGTGACTCATTGTGGATGGAATTCAACTATAGAAGCAGTGACAGTTGGAGTACCTATGATTACTTGGCCTGTGGGTGCTGAGCAATTTTACAATGAGAAGTTGGTAACTGATGTGCTTAAAATTGGTGTACCTGTTGGAGTTAAAAAATGGGTTGGAGTGGTTGGTGATAGTGTTCAATGGAGTGCAGTTGAAAAAGCTGTGAAGAGGGTTATGGAAGGAGAAGAAGCTGAGAAAATTAGGAAGAAATCAAAAGTGCTTTCACAAATGGCAAATAAGGCTGTGGAAGAAGGTGGATCATCTTCTTCACAGTTGAATGCTTTTATTGAGGAGATGGGTTTAGTATGCAATCATACCAATGTATCTCACAAGAATAATTTGCATGTCTAG 1488 0.3636 MNTQSNPLHIIFFPFMGHGHMIPTIAMAKLFASKGIKATIVTTPLNKPMISNAIEQSKIHSNNNIDIQTIKFPCVEGGLPEGCENVDAIPSPQLVPTFFTATKLLQKPFEELLLQQKPHCIIADMFFPWATDSAAKFGIPRIVFHGISFFSLCAGQCMKQYEPHKNVSSDTELFEIPNLPGNIKLTRLQLPSIFTKDDSITKNIAKLFAEIRESEVKSYGVIVNSFYELESVYADYYREVLGTKEWHIGPISIHNRIKEEELTSYRGNETSIDKHYCLKWLDTKKINSVVYLCFGSTTSFLNSQLKEIAMGLEASGHNFIWVVKKKYEDEEKCKLESFEKRMKGKGLIIRGWSPQRLILEHKAIGAFVTHCGWNSTIEAVTVGVPMITWPVGAEQFYNEKLVTDVLKIGVPVGVKKWVGVVGDSVQWSAVEKAVKRVMEGEEAEKIRKKSKVLSQMANKAVEEGGSSSSQLNAFIEEMGLVCNHTNVSHKNNLHV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03290 495 ProSitePatterns UDP-glycosyltransferases signature. 352 395 IPR035595 -
Tsu02g03290 495 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 6 479 - -
Tsu02g03290 495 Gene3D Glycogen Phosphorylase B; 276 462 - -
Tsu02g03290 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 478 - -
Tsu02g03290 495 Gene3D Glycogen Phosphorylase B; 1 274 - -
Tsu02g03290 495 CDD GT1_Gtf-like 8 478 IPR002213 GO:0008194
Tsu02g03290 495 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 287 404 IPR002213 GO:0008194
Tsu02g03290 495 PANTHER GLYCOSYLTRANSFERASE 6 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03290 Tsu-Chr2 36813974 36815461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03290 8 478 Glycosyltransferase AT2G15490 52.708 9.11e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03290 K23260 - gmx:100818708 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03290 02 36813974 36815461 Tsu02g03290 02 36813974 36815461 ECH