Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03071 atgtcAGTTTCAGCAACATCATCACTAGTTGCCCCAACTACTAACGCCAATTCCAATTCCTCAAGACGTTCGGCAAATTATCACCCCAACATTTGGGGGGATCATTTTATTCAATATGCTCACGAGGAACCTACgGAATTGGATGAAATAATAAAGCAGATTATAATGTTAAAAGAAAAGGTGAACGAGATGCTTCTTCCTATAAATGAGAATGACACAAGCCTCTTGAGCGAAGCGAATTTGATCGATTCAATCCAACGTTTGGGTTTATACCATCATTTTGAGCATGAGATTGAAGAATTATTGCGACAAATTCACAATAATTATGTTGAAAATGGAACAATAACTCTTAACGAAGACCTTCATTCTATTGCACTTGTCTTCAGGTTACTAAGGCAACAAGGATATCACATTTTGCCGGATGTTTTTAAGAAGTTCAAGAATGAGCAAGGGAACTTCATTGAAACACTTATTGGTGATGTTGAGGGAATGCTAAGCTTGTACGAAGCAACACATATGAGGATTCATGGAGAGGACATATTAGATGAAGCACTTTCTTTCACTTCTTTACACCTTAAAATGATGGCCACTCAATTGAGTCCTTCTCTTGCTACAAAAATTAATCATAGCTTAAAGCGACCACTCTTCAAGAACTTGCCTAGGCTAGTGGCAAGGCATTACATTTCCAATTATGAAGAAGACCCCTCACATGATGCAACTTTGTTATTACTCGCCaaattaggtttcaatttgctTCAAAAACAACATCGGAATGAAATTGGCGATATTTCAATGTGGTGGAAAGATTTagattttgaaacaaaattgcCATTTGCACGAAATAGAATAGTTGAAGCTTACTTTTGGATATTGGGAGTGTATTTTGAGCCTCAATACTCTACTGGTAGAAGGATATTAACCAAGGTGATATCCTTGGCGTCAGTAATTgatgatatatatgataattatggTACAATAGAAGAGATACAACTTTTCACTCAAGCAATTGAAAGGTGGGATATCAGTTGCATGGATTTTCTACCAGAATACATGAAAATTTGCTATAAAGCCGTTTGGGATGTTTTTGAAGAAATGGAACAAGAGATGGTCAAGGAAGGCAGAACATTTTGTGTAATCTATGCCAAAAATGAAATGATAAGATTGGTCCAAGCCTACTATACCGAGGCCCAATGGTTCAATAGAAATTATATTCCAACAGTAGAAGAATACACGGCTCTCGGAATAGTAAATTCTGGTTACTATCTAATCACAACAACATCTTTCATTGGAATGGGATGCATTGCTACAGAAGATATTTTCCAATGGTTAACCAATAACCCCAAAATTGTTAATGCTACATCAATAATTGCCAGGCTTATGGATGACATTGTTTCCAATGAGtttGAGCAGGAGAGAGGGCACGGTGCCTCTGCTATTGAGTGTTACATAAATCAACATGGTGTATCTAGAGAAGATGCAATTAATGAACTTTTAAGACAAGTGTCAAATGCTTGGAAGGATACCAATGAGGAACTTCTTGATCCAACTCAAGTGCCTAAGCCTCTCCTCATTCGAGTTCTCAATTTGTCACGTGTCATTGATGTGCTTTACAAAGATGAAGATTGTTACACTAACTCCCAAGGATCAACAAAGAATGATATTATATCTATCTTGTTGAATCCATGTCCAATATGA 1695 0.3569 MSVSATSSLVAPTTNANSNSSRRSANYHPNIWGDHFIQYAHEEPTELDEIIKQIIMLKEKVNEMLLPINENDTSLLSEANLIDSIQRLGLYHHFEHEIEELLRQIHNNYVENGTITLNEDLHSIALVFRLLRQQGYHILPDVFKKFKNEQGNFIETLIGDVEGMLSLYEATHMRIHGEDILDEALSFTSLHLKMMATQLSPSLATKINHSLKRPLFKNLPRLVARHYISNYEEDPSHDATLLLLAKLGFNLLQKQHRNEIGDISMWWKDLDFETKLPFARNRIVEAYFWILGVYFEPQYSTGRRILTKVISLASVIDDIYDNYGTIEEIQLFTQAIERWDISCMDFLPEYMKICYKAVWDVFEEMEQEMVKEGRTFCVIYAKNEMIRLVQAYYTEAQWFNRNYIPTVEEYTALGIVNSGYYLITTTSFIGMGCIATEDIFQWLTNNPKIVNATSIIARLMDDIVSNEFEQERGHGASAIECYINQHGVSREDAINELLRQVSNAWKDTNEELLDPTQVPKPLLIRVLNLSRVIDVLYKDEDCYTNSQGSTKNDIISILLNPCPI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03071 564 MobiDBLite consensus disorder prediction 1 24 - -
Tsu02g03071 564 SFLD Isoprenoid Synthase Type I 239 562 - -
Tsu02g03071 564 Pfam Terpene synthase family, metal binding domain 242 507 IPR005630 GO:0000287|GO:0010333|GO:0016829
Tsu02g03071 564 Gene3D - 73 237 IPR036965 GO:0010333|GO:0016829
Tsu02g03071 564 PANTHER OS04G0344100 PROTEIN-RELATED 5 548 - -
Tsu02g03071 564 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 237 IPR008930 -
Tsu02g03071 564 SUPERFAMILY Terpenoid synthases 237 564 IPR008949 -
Tsu02g03071 564 PANTHER TERPENE SYNTHASE 2-RELATED 5 548 - -
Tsu02g03071 564 CDD Terpene_cyclase_plant_C1 22 561 IPR044814 GO:0010333|GO:0016102
Tsu02g03071 564 Gene3D Farnesyl Diphosphate Synthase 29 552 IPR008949 -
Tsu02g03071 564 SFLD Terpene Cyclase Like 1 C Terminal Domain 239 562 IPR034741 -
Tsu02g03071 564 Pfam Terpene synthase, N-terminal domain 31 211 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03071 Tsu-Chr2 34062505 34069099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03071 K15803 K14183 aprc:113865764 749.969