Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03051 ATGCGTGCCGCTACCGTAAGAAAATTCTGCACTCTCAGCACCTTATTCCGTTCACATGTACAAAACAATCCCAAAAAAAACCCTTCTTCCATCATTACATCAATTCCATGTGAACCCCAACAACATTTTCAGTCTGACTTGTACCTTTCAACCCTCAAACTCCATGGTCCTTCTCCACCAGAGGATTTGCCTGATCTCGACTTCGACCCAGCCACTGCTCAGCTTTCTAATATATTGTACACTCCTCCGGTGACGAAGGTTGGCTGTGAGGaagttgatgatgaagaaaaagagaaaagtgTATTGGAAATACCAGTGATACGAGACTCTTTAAATGTTGATGCTTCGATGAGACGGAAGGATGTAGGACGTGAGAGGAAACAAAAATGGATTTTCAAATATACTGGTGATGAACGATCTGACAGGTTAATACATATTTGTGCTAAAAAACTAGGAACAACTGCTACTGTTGATGTGTTTGGTCGCTTGGGTCGAGAAACAGGTCTGAAAGAGTACCATGGATTGATCAAAATGTGCATAAAGAAGGCTAGGGCGACTAATGATGAAAACATTTCTATGGAAGAAATAAGTAAGGCTTATTACCTTTTAAAATTAATGAGGGAATGCGGGTTCCAGCTAGAAGAGCAAACATATCGCCCAGTTCTTGAGTATATAACTGACATGGGCCTTGTTCAAGAATTTCAACTTTTCTATGATGTTATCCAAGGCAGTAATCCCAGTTCAATTTCACGTTTGGGTTACTACGAAATGTTGCTCTGGATAAGGGTTAACAATGAAGAAATGATCCGGGATATTTGTGAATACATTACAGTCGAAGAGAGTAAAGACACTTCTGCTTTACGAGAAAATTACTTATTGGCCCTTTGTGAAAGTGATCGCAATACACAGATTTTGGACGTGTTGAAAAATGTTGACATAACAAAGCTTACATCTGCACAatctatatcaaatatatttcaaTCACTGGGAAGGCTACAGCTGGAATCAGATGCAGAGAATTTACTTTTGGATTTGACAGCATGTGATTACGGTGCAGATCATATTTCAAACTTCATTGCTTGTTATGCAGTTAGCATTCCAAATTTAGCGGTCAAGGATATCATCTCAAAAATGGAGAATTTGCATGATGTATTGGAAGTTTTGCCTTCATCCTCTGCATATGAAAAGCTCATTTCGTATTGCTGTGATACGCACAAGGTGGATGTAGCTCTTGATATTGTTgataaaatgtgtgaagcaggCTTTAGGCCGTCTACTCATGTGTTACAAACCATAGTACATATTTGTGAGGAAACTTATGATTATATTTTGGTTCATCGAATCTATTCCATCATAAGATGCCATCACCACAATTTGGAATTAAATGGTGAAATATGCAGGTGTTTGGTACAGTTTTGTGTAAGAATAAAAGATTTTCAACGTGCATTCGAGATGGTTAATGAATTGCAGGAAATGAATTTCAAACCTACGACAGCCATGTACAATGCCATAATGGCAGGATATTTTCGCGAGAAAAACATCAGTGGTGCGTTGAAGGTCCTAAAACACATGCAAGATGTCAATTTAAAGCCTGATTCACAGACTTTCACCTATTTGTTCAGCAATTGTGGTAACGAAGAGGATATAAATAGGtatTATGAAGAGCTGAAACAATCTGGAACCCACcctacaaaacaaatttttatggCCCTTATCAATGGATATGCAGCCTGCGGCGAATTGGAGAAGGCAAAACAGGTAGTTCATGATCCACGCATACAGTTGAAGTACTTAAATGAAATTAAGAGTGTCCTTGTCTCAGTTCTTGCATCTCATGGGCAATTGTCTGAGGCACTTGTTATCTATGAGGAGATCAAGAAAGCTGGACACCATTTGGAGCCAAAAGCTGTTATAAGTCTCATTGATGAGTTCCGTCATATAAGTGGAGAGTTGGAGGGGTTGCTTCTTCTGCTTAATGAGTTGAGTGATCTAGACTACTGGGTTGATGGTTGCTATAGGGTTATCCAGTACTGTGTTGAGAACAATCATTTGAGTACTGCTGTTGACCTGTTCAAGCAACTCAAGGATAATTTCAAACATGACGAATTAATGACAGAAGTTCTTTTCGATGGAGCGTATGCTGTAATCGCAGGATCCGAGTCCCCACATTTGCAGTTTGGTATGGACTTGCTTTGGGCAATCAAGGATGAGCTTGGCCTTGTTCCTTCACGGCAGTGTCTCGATTTTCTTCTTAGTGCTTGTGCCCAGTCAAAAGATTTGAATAACACTCGTTTGGTTTGGAGAGAATATGAAGTTTGTGGATATCCTTACAATGTATTGAGTTACGTGAGGATGTATCAAGCACTTTTGGCATCAGGAGATCACAGATCTGCTGAAGTTGTAGTCAAGAAAATTCCAAGAGATGACGCTGAGATTTGTTCTTTAATCTTAGCATGTCAACAAACTTACAGTGCTAAAATTAAATCACTAGAGTGGGAGAAGGAGAAAGAGAATGTTAAATCAGTCAAAGgggtgaagaagaaaaagactGTTACATCAGTAGAAggggagaagaagaaaaagaatgttACATCAgtagaagaagagaagaagaagaagaaaaagagaaagaaaaagaaagcaacagaagagaaaaaaatagagtaA 2667 0.3648 MRAATVRKFCTLSTLFRSHVQNNPKKNPSSIITSIPCEPQQHFQSDLYLSTLKLHGPSPPEDLPDLDFDPATAQLSNILYTPPVTKVGCEEVDDEEKEKSVLEIPVIRDSLNVDASMRRKDVGRERKQKWIFKYTGDERSDRLIHICAKKLGTTATVDVFGRLGRETGLKEYHGLIKMCIKKARATNDENISMEEISKAYYLLKLMRECGFQLEEQTYRPVLEYITDMGLVQEFQLFYDVIQGSNPSSISRLGYYEMLLWIRVNNEEMIRDICEYITVEESKDTSALRENYLLALCESDRNTQILDVLKNVDITKLTSAQSISNIFQSLGRLQLESDAENLLLDLTACDYGADHISNFIACYAVSIPNLAVKDIISKMENLHDVLEVLPSSSAYEKLISYCCDTHKVDVALDIVDKMCEAGFRPSTHVLQTIVHICEETYDYILVHRIYSIIRCHHHNLELNGEICRCLVQFCVRIKDFQRAFEMVNELQEMNFKPTTAMYNAIMAGYFREKNISGALKVLKHMQDVNLKPDSQTFTYLFSNCGNEEDINRYYEELKQSGTHPTKQIFMALINGYAACGELEKAKQVVHDPRIQLKYLNEIKSVLVSVLASHGQLSEALVIYEEIKKAGHHLEPKAVISLIDEFRHISGELEGLLLLLNELSDLDYWVDGCYRVIQYCVENNHLSTAVDLFKQLKDNFKHDELMTEVLFDGAYAVIAGSESPHLQFGMDLLWAIKDELGLVPSRQCLDFLLSACAQSKDLNNTRLVWREYEVCGYPYNVLSYVRMYQALLASGDHRSAEVVVKKIPRDDAEICSLILACQQTYSAKIKSLEWEKEKENVKSVKGVKKKKTVTSVEGEKKKKNVTSVEEEKKKKKKRKKKKATEEKKIE 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03051 888 PANTHER OS02G0132600 PROTEIN 7 838 - -
Tsu02g03051 888 Pfam PPR repeat 568 588 IPR002885 -
Tsu02g03051 888 Pfam PPR repeat 604 629 IPR002885 -
Tsu02g03051 888 TIGRFAM PPR: pentatricopeptide repeat domain 500 533 IPR002885 -
Tsu02g03051 888 TIGRFAM PPR: pentatricopeptide repeat domain 393 425 IPR002885 -
Tsu02g03051 888 TIGRFAM PPR: pentatricopeptide repeat domain 465 497 IPR002885 -
Tsu02g03051 888 MobiDBLite consensus disorder prediction 838 870 - -
Tsu02g03051 888 Gene3D Tetratricopeptide repeat domain 672 887 IPR011990 GO:0005515
Tsu02g03051 888 Gene3D Tetratricopeptide repeat domain 454 671 IPR011990 GO:0005515
Tsu02g03051 888 PANTHER OS02G0132600 PROTEIN 7 838 - -
Tsu02g03051 888 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 497 531 IPR002885 -
Tsu02g03051 888 Gene3D Tetratricopeptide repeat domain 139 453 IPR011990 GO:0005515
Tsu02g03051 888 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Tsu02g03051 888 Coils Coil 864 886 - -
Tsu02g03051 888 MobiDBLite consensus disorder prediction 838 888 - -
Tsu02g03051 888 Pfam Pentacotripeptide-repeat region of PRORP 392 558 IPR033443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03051 Tsu-Chr2 33714331 33723430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03051 329 661 Glycosyltransferase AT1G05670 23.529 3.91e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03051 - - cam:101502375 1274.61