Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03038 ATGCTTTCTGCTAGCAAACTCAAATCTGTTGATTTTTACAGAAAAATCCCAAGAGATTTGACCGAAGCGTCGTTGTCAGGAGCGGGATTATCCATAATTGCAGCTCTCGCCatgatgtttttgtttggaATGGAacttaataattattttgctGTCACCACCTCTACATCTGTGATTGTTGACAAGAGTTCTGATGGTGACTTTTTACGTATAGAATTCAATATCAGTTTTCCTGCACTCTCGTGTGAGTTTGCATCAGTCGACGTGAATGACGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCAAATTTAAGACCCACTGGCTCCGAGTTTCATTCGGGAACAAATGCAAATGCTGTTAAGCATGATGATCAAGTAGATGAAGAGTTTGTTGAAGGTGCTTTGCCACTCACGTCACAAAACTTTGATAAATATATTCATCAGTTTCCAATTACAGTTGTAAATTTTTATGCACCTTGGTGTTCCTGGTGCCAACGTTTGAAACCGTCATGGGAGAAGACAGCTACAATAATGAGAGAGAGataTGATCCAGAAATGGATGGGCGTATTCTTTTGGCAAAGGTTGATTGCACTCAAGAAAGTGATTTATGCAGGAGGCATCACATACAAGGATATCCGTCTATTCGCATCTTTCGGAAAGGAAGTGATGTCAGAAGTGACCATGGACATCATGAACACGAGTCCTATTATGGAGATCGTGATACAGAAAGCCTAGTCAAGACAATGGAGAGTTTAGTGGAATCTCTCCCAACAGGATCTCAACATCTAGCCTTGGAAGATAAATCCAATGGAACAGTAAAAAGACCGGCACCATCAACCGGTGGATGTAGAGTTGAGGGATTTGTGCGTGTGAAAAAGGTTCCAGGAAGCTTGATCGTCTCAGCTAGATCAGATGCGCATTCATTTGATGCTTCGCAAATGAACATGTCACATGTCGTAAACCATTTATcttttgggaaaaaaataatGGCCAGAGCCATGAGTGATGTGAAGAATTGGATACCATACATTGGTAGCAACCATGACAGGCTGAATGGCCGGTCATTTATCAATACTCGTGATTTGGAAGGAAATGTTACTATCGAGCATTATATTCAGGTAGTCAAAACAGAGGTAATATCCAGGAAAGGCTATAAATTAATTGAGGAGTACGAGTACACAGCCCACAGCAGTGTAGCACACAGTGTAAACATTCCTGTTGCAAGGTTCCATCTTGAGCTCTCCCCCATGCAGGTCGTAATAACAGAAAACCAGAAGTCTTTTTCACATTTTATCACGAATGTCTGTGCTATTATTGGGGGTGTTTTCACGgTAGCTGGAATTGTTGACTCGATTCTGCATAACACTATTAGGgcaatgaaaaaaattgagctTGGCAAGAATTTTTGA 1437 0.3918 MLSASKLKSVDFYRKIPRDLTEASLSGAGLSIIAALAMMFLFGMELNNYFAVTTSTSVIVDKSSDGDFLRIEFNISFPALSCEFASVDVNDVLGTNRLNITKTVRKFSIDSNLRPTGSEFHSGTNANAVKHDDQVDEEFVEGALPLTSQNFDKYIHQFPITVVNFYAPWCSWCQRLKPSWEKTATIMRERYDPEMDGRILLAKVDCTQESDLCRRHHIQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTESLVKTMESLVESLPTGSQHLALEDKSNGTVKRPAPSTGGCRVEGFVRVKKVPGSLIVSARSDAHSFDASQMNMSHVVNHLSFGKKIMARAMSDVKNWIPYIGSNHDRLNGRSFINTRDLEGNVTIEHYIQVVKTEVISRKGYKLIEEYEYTAHSSVAHSVNIPVARFHLELSPMQVVITENQKSFSHFITNVCAIIGGVFTVAGIVDSILHNTIRAMKKIELGKNF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03038 478 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Tsu02g03038 478 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 478 IPR045888 -
Tsu02g03038 478 Pfam Thioredoxin 145 243 IPR013766 -
Tsu02g03038 478 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 478 - -
Tsu02g03038 478 SUPERFAMILY Thioredoxin-like 144 262 IPR036249 -
Tsu02g03038 478 Gene3D Glutaredoxin 129 283 - -
Tsu02g03038 478 ProSiteProfiles Thioredoxin domain profile. 120 263 IPR013766 -
Tsu02g03038 478 Pfam Endoplasmic reticulum vesicle transporter 287 459 IPR012936 -
Tsu02g03038 478 CDD PDI_a_family 144 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03038 Tsu-Chr2 33600085 33607805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03038 - - aprc:113860202 855.899