Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03032 ATGAGAAGGGAATGTCATCCATTGTTGAGGGGTGTGAGAGAGAATAACAAATATAAACATGGTTTTTCTGTATATGAGATGGACTCACTCACAAGTATATGTGAGGTTGTGTTGCCTTCATTACCAATGGATATTGATGCTCTAAAGAAGCTTAGAAAAGAAGAtcaagatgatgaagatgaggaTGTTTCAATCAAAAATGTGCAGTCTTTCTTCAATACCTCTGCTTCTCAGTATCAAATCCCTCATGAgGTAGCTGAGATGTTATTGAAGAGGGGAGTAACAGAAGCAGTGGTATTGATTAGAGTGATTCTATGGCTTTTAGCAACAAGGTTGGGCACTTTGTTGATTTGTGGTTTGCTCTGTCTTAGTAAGGAATGGCCATTTATCAACAACTTCTCAAGTATGTCTTTGGATAAAAGAGAAAAGATTATGCAAAGGGGTCTCAAGCATAAGTTCCTCACTCCTTTTAGACTCGCATTTGCTTATATCAAAGTCCTATGCCTCTTTGTTTTCTTCTCTCGGgTTGATGAAAATGGTGATAATCCATCATGGAAAGCCATTGGATATGAGGTATTATCGGCCAAAGAGAAAACAACAAATGTCAACAAAAAGAGACCCCTCGAAAAAGGGATTATAGAAACCATGCATGAAAATGACTCAACTCTTCAACGCTCTCTAATTAACAAAGGCCTCAATGTTACACTAGATTCTAAAAACAACACACTCAAAATCAAATGTGATGCAGTAGTTGTTGGTTCTGGCTCTGGAGGAGGTGTAGCAGCTTCTGTCCTTTCAAATGCGGGACACAAAGTGCTTGTTCTAGAGAAAGGAAATTATTTTGTTCCAGAAGATTATTCATCACTAGAAGGTCCTTCGATGGATCAACAATATGAATGTGGAGGTATGTTAGCTTCTGTTGATTCAAGAATACTTGTTTTGGCAGGTTCAACAGTTGGTGGTGGTTCAGCTGTAAATTGGTCAGCTTGCATAAGAACACCAAAAAAAGTGTTGAAAGAATGGTCAGAGGAACACAAACTTTCCATTTTTTCAAGCATAGAGTATCTATCTGCTATGGAAATTGTGTGTGAAAGAATTGGTGTCAATGAAAATTGTACCCATGAAAGTTTACAAAATCAAGTACTAAGAAAAGGGTGCCAAAATCTTGGCTTAAAAGTTGATTATGTACCAAGAAATTCATCGGGGAATAATCATTATTGTGGTTCATGTGGTTATGGTTGTCCAAAAGGAGAGAAACAAGGGACTCAAGTTACATGGCTTGTTGATGCTGTTGAAAAAGGTGCTGTGATAATAACAGGATGCAAAGCTGAGAGGTTTTTATTTGAAAGTAATTACAGGAATGGAAATGCAAGAAAGAAGAAATGTTTGGGAGTTTTGGCAAAGACTTTAAACAGAAGAGTCACAATGAAGCTACAAATTGAGGCCAAAGTAACAATTTCTGCATGTGGTGCACTTTTGACACCACCATTGATGATATCTAGTGGcttaaagaataaaaacatTGGTAGGAACCTTCATCTTCACCCTGTGTTAATGACATGGGGATATTttccagaatcaaaatcaaatctcaaagGTAAAGTATATGAGGGGGGAATAATCACATCTGTACATAAAGTACTATCATCACCAAGTGATGATTCAAAATCAGACACAAGAGCCATAATTGAAACACCATTACTAGGACCATCATCATTTGCATCACTATGTCCATGGGAATCAGGACTAGACTTCAAACAAAGAATGCTAAAATTTTCAAGAACATCACATTTAATCACAATAATAAGAGACAAATCAAGTGGAAAAGTAACAACAGAGGGAAGAATAAGCTACAAATTGGATTCAACTGACAAAGAGAATATGAGAGCTGGCTTACAACAAGCAATAAGGATTCTAATAGCAGCAGGAGCAGTTGAAGTAGGAACACACAGAAGTGATGGTCAGAGAATTAAGATTAATGAGAATATTAGcgaaaagaaaattgaagaatttATAAATGATGTTTGTCCTATGGATGGCGCATTGTGGCCGGGTGAGAGCTGGAATTTGTATAGTTCTGCTCATCAAATGGGGAGTTGTAGAATGGGTGTGAATCAAAAGGAAGGTGTTGTTGATGAAAATGGTGAGAGTTGGGAAGCTGAAGGGTTGTTTGTTTGTGATGCTAGTGTTCTTCCTACCGCTGTTGGTGTTAATCCTATGATTACTATTCAATCAACTGCTTGTTGTATCTCAAGTAGAATTGTAGATTTTCTTAAAAAGGGTCAAGAATCAAAagattgttga 2304 0.3585 MRRECHPLLRGVRENNKYKHGFSVYEMDSLTSICEVVLPSLPMDIDALKKLRKEDQDDEDEDVSIKNVQSFFNTSASQYQIPHEVAEMLLKRGVTEAVVLIRVILWLLATRLGTLLICGLLCLSKEWPFINNFSSMSLDKREKIMQRGLKHKFLTPFRLAFAYIKVLCLFVFFSRVDENGDNPSWKAIGYEVLSAKEKTTNVNKKRPLEKGIIETMHENDSTLQRSLINKGLNVTLDSKNNTLKIKCDAVVVGSGSGGGVAASVLSNAGHKVLVLEKGNYFVPEDYSSLEGPSMDQQYECGGMLASVDSRILVLAGSTVGGGSAVNWSACIRTPKKVLKEWSEEHKLSIFSSIEYLSAMEIVCERIGVNENCTHESLQNQVLRKGCQNLGLKVDYVPRNSSGNNHYCGSCGYGCPKGEKQGTQVTWLVDAVEKGAVIITGCKAERFLFESNYRNGNARKKKCLGVLAKTLNRRVTMKLQIEAKVTISACGALLTPPLMISSGLKNKNIGRNLHLHPVLMTWGYFPESKSNLKGKVYEGGIITSVHKVLSSPSDDSKSDTRAIIETPLLGPSSFASLCPWESGLDFKQRMLKFSRTSHLITIIRDKSSGKVTTEGRISYKLDSTDKENMRAGLQQAIRILIAAGAVEVGTHRSDGQRIKINENISEKKIEEFINDVCPMDGALWPGESWNLYSSAHQMGSCRMGVNQKEGVVDENGESWEAEGLFVCDASVLPTAVGVNPMITIQSTACCISSRIVDFLKKGQESKDC 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03032 767 Pfam GMC oxidoreductase 613 749 IPR007867 GO:0016614
Tsu02g03032 767 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 760 - -
Tsu02g03032 767 SUPERFAMILY FAD/NAD(P)-binding domain 242 755 IPR036188 -
Tsu02g03032 767 Gene3D - 687 765 IPR036188 -
Tsu02g03032 767 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 760 - -
Tsu02g03032 767 Gene3D - 232 555 IPR036188 -
Tsu02g03032 767 PIRSF Lg_Ch_AO 8 764 IPR012400 GO:0046577
Tsu02g03032 767 Pfam GMC oxidoreductase 248 517 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03032 Tsu-Chr2 33505018 33509563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03032 87 761 Acyl Lipid Metabolism Gene Families AT3G23410 61.652 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03032 K17756 - gmx:100799413 1148.27