Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03018 ATGGTTTCCACTAGCCAAAAACAATACATATTTATTCTGTTCCTCCTATTTGCACTTTGCATTACCAATGTAATGTCAAGAAAGTTGCAACAATCCTCATCATCTTTACAAGAAAGACATGAGCAATGGATGACAAAATATGACAAAGTGTATAAAGATGATGCTGAGAGGGAAAAACGTTTCATGATATTCAAGGACAATGTTGAATTCATTGAATCATTCAATGCTGCTAACAACAAACCTTATAAGCTAAGTGTTAATCACCTAGCTGATTTGACACTTGAAGAATTTAAGGCTTCTCGTAATGGTTACAAAAAAAGGTCTCTTGAGTTTACAACAACATCATTTAAGTATGAAAATGTGACTGATATTCCGGAAGCTATAGATTGGAGGACAAAAGGAGCAGTTACTCCAATCAAGGATCAAGGTCAATGTGGGAGCTGCTGGGCATTTTCAACTGTTGCAGCAACCGAAGGTATCAACCAAATCACAACCGGTAAACTAATCTCCCTCTCAGAACAAGAGCTAGTTGATTGCGACACAAAAGGTGAAGACCAAGGATGTGAAGGAGGATTAATGGAAGATGGATTTgaatttatcattaaaaatgGCGGAATCACCAGCGAGGTTAACTACCCTTATAAAGCAATTGATGGAAGTTGTAACTCTGCAACCATACCTGCAGCTAAAATTAAGGGCTATGAGCAAGTTCCAGTTAATAGTGAGGATTCACTTCTCAAAGCTGTTGCTAACCAGCCAATATCAGTTTCTATTGATGCTAGTGACTCAAGCTTCATGTTTTACTCTAGTGGAATTTATACCGGAGAGTGTGGTACTGAGCTAGATCATGGTGTTACTGCTGTTGGTTATGGTAATGCTAATGGTACTGATTATTGGCTTGTGAAGAATTCATGGGGCACTGTGTGGGGTGAGAAAGGATACATAAGGATGCAAAGAGGTATAGTTGCTAAGGAAGGATTGTGTGGTATTGCCATGGATTCCTCTTATCCAACTGCTTAA 1020 0.3824 MVSTSQKQYIFILFLLFALCITNVMSRKLQQSSSSLQERHEQWMTKYDKVYKDDAEREKRFMIFKDNVEFIESFNAANNKPYKLSVNHLADLTLEEFKASRNGYKKRSLEFTTTSFKYENVTDIPEAIDWRTKGAVTPIKDQGQCGSCWAFSTVAATEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSEVNYPYKAIDGSCNSATIPAAKIKGYEQVPVNSEDSLLKAVANQPISVSIDASDSSFMFYSSGIYTGECGTELDHGVTAVGYGNANGTDYWLVKNSWGTVWGEKGYIRMQRGIVAKEGLCGIAMDSSYPTA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03018 339 SMART pept_c1 124 338 IPR000668 GO:0006508|GO:0008234
Tsu02g03018 339 CDD Peptidase_C1A 125 337 IPR039417 -
Tsu02g03018 339 SMART Inhibitor_I29_2 40 97 IPR013201 -
Tsu02g03018 339 SUPERFAMILY Cysteine proteinases 34 338 IPR038765 -
Tsu02g03018 339 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 281 291 IPR025660 -
Tsu02g03018 339 Pfam Papain family cysteine protease 124 337 IPR000668 GO:0006508|GO:0008234
Tsu02g03018 339 Gene3D Cysteine proteinases 18 339 - -
Tsu02g03018 339 PRINTS Papain cysteine protease (C1) family signature 298 304 IPR000668 GO:0006508|GO:0008234
Tsu02g03018 339 PRINTS Papain cysteine protease (C1) family signature 283 293 IPR000668 GO:0006508|GO:0008234
Tsu02g03018 339 PRINTS Papain cysteine protease (C1) family signature 142 157 IPR000668 GO:0006508|GO:0008234
Tsu02g03018 339 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 298 317 IPR025661 -
Tsu02g03018 339 PANTHER SENESCENCE-ASSOCIATED GENE 12 29 338 - -
Tsu02g03018 339 Pfam Cathepsin propeptide inhibitor domain (I29) 40 97 IPR013201 -
Tsu02g03018 339 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 29 338 - -
Tsu02g03018 339 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 142 153 IPR000169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03018 Tsu-Chr2 33364073 33365374 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03018 - - gmx:102664257 556.984