Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03015 ATGACTTCcctaaataattttattttagccaTGTTTCTAATTTTCATAACATGTATTCGTCTCCCTCATGTAATGTCTAGCAGAGTCCTTGAACTTTTATCATCaaataaacatgaaaaatgGATGGCACAATTTGGAAAAACATACAAAGATGCAGCAGAGAAAGAAAAACGTTTTCAAATATTCAAGAACAATGTTGAGTTCATTGAATTGTTCAATGCTGCTGGTGACAAACCTTTCAACCTTAGCATTAACCATTTTGCAGACCTAACTAATGAAGAATTTAAGGCTTCACTTAATGGTAAAAAGAAGTTACATCATGGGACTGAAACGAGCTCGTTCAGGTATCACAATGTAACTTCTATTCCTGCTACCATGGATTGGAGGAACAGAGGTGCTGTTACTCCAATTAAAGATCAAGGCACATGCGGTAGTTGTTGGGCATTTTCAGCTGTGGCTTCCATAGAGAGCATCCACCAAATAACTACAGGTGAATTAGTGTCACTATCAGAACAAGAATTGGTAGATTGTGTTAAAGGTAACAGCAGCGGATGTAGCGGTGGTTACATGGAAGACGCATTCGAATTCATTGTGAAAAAAGGAGGAATAGCAAGTGAAACAAACTACCCTTACAAAGAAGCAGACAAGAGATGTAAGGTTAAAAAGGAATCAAAGTATGTAGCTGAAATCAAAGGGTATGAGAAAGTTCCTGCTAACAATGAAAACGAACTTCTCAAAGCTGTGGCGAATCAACCAGTATCTGTTTATATTAATGGAGGTGGTCatgcttttcaattttattctgGTGGAATTTTTACTGGAAAATGTGGAACTGATCCTGATCATGCTGTTACAGTGGTTGGTTATGGTGAATCAAATGATGGTATTAAATATTGGTTGGTGAAAAATTCATGGGGTACTGAATGGGGTGAGAAAGGGTACATGAGATTGATGCGAGACATTGGTTCTAAGAAAGGTTTATGTGGAATTATTGCCAATAATCCCTCTTATCCTGTTGCTTAA 1023 0.3578 MTSLNNFILAMFLIFITCIRLPHVMSSRVLELLSSNKHEKWMAQFGKTYKDAAEKEKRFQIFKNNVEFIELFNAAGDKPFNLSINHFADLTNEEFKASLNGKKKLHHGTETSSFRYHNVTSIPATMDWRNRGAVTPIKDQGTCGSCWAFSAVASIESIHQITTGELVSLSEQELVDCVKGNSSGCSGGYMEDAFEFIVKKGGIASETNYPYKEADKRCKVKKESKYVAEIKGYEKVPANNENELLKAVANQPVSVYINGGGHAFQFYSGGIFTGKCGTDPDHAVTVVGYGESNDGIKYWLVKNSWGTEWGEKGYMRLMRDIGSKKGLCGIIANNPSYPVA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03015 340 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 26 339 - -
Tsu02g03015 340 SUPERFAMILY Cysteine proteinases 36 331 IPR038765 -
Tsu02g03015 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 298 317 IPR025661 -
Tsu02g03015 340 SMART Inhibitor_I29_2 38 95 IPR013201 -
Tsu02g03015 340 PRINTS Papain cysteine protease (C1) family signature 140 155 IPR000668 GO:0006508|GO:0008234
Tsu02g03015 340 PRINTS Papain cysteine protease (C1) family signature 282 292 IPR000668 GO:0006508|GO:0008234
Tsu02g03015 340 PRINTS Papain cysteine protease (C1) family signature 298 304 IPR000668 GO:0006508|GO:0008234
Tsu02g03015 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 140 151 IPR000169 -
Tsu02g03015 340 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Tsu02g03015 340 Pfam Papain family cysteine protease 122 338 IPR000668 GO:0006508|GO:0008234
Tsu02g03015 340 CDD Peptidase_C1A 123 338 IPR039417 -
Tsu02g03015 340 PANTHER SENESCENCE-ASSOCIATED GENE 12 26 339 - -
Tsu02g03015 340 SMART pept_c1 122 339 IPR000668 GO:0006508|GO:0008234
Tsu02g03015 340 Gene3D Cysteine proteinases 20 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03015 Tsu-Chr2 33322412 33324153 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03015 - K16292 gmx:113001896 484.182