Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02870 ATGGCGTCTGATGCAGAACAACCTCCCCTTTCCTCTCTCTCAAAGGAAGGAAAGTCACCTGCTGACGATAGAAGTGAAAGGGAGCGTTTGCTTAATGGATTTCATGGCTCTCAAGACTATTCCATCTCTGCTGCAATTCTCCCATTTCTCTTCCCGGCTTTTGGTGGTCTACTATTTGGCTATGACATTGGTGCCACATCTAGTGCAACAATTTCCATTCAGTCACCATCACAAAGTGGAATAACTTGGTACGACTTAGACTCCGTTGAAATTGGACTTCTCACTAGTGGATCATTATATGGTGCCTTAATAGGTTCTGTGTTAGCCTTCAATGTTGCTGACTTCTTAGgaagaagaagagagctGCTTGTTGCTGCACTGATGTATCTTGGTGGAGCCCTTATAACAGCATTCGCTCCTAATTATCCTGTATTGGTGATTGGAAGATTGGTATTTGGCATAGGCATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACACCAATACGTGGACAACTAATCTCTCTGAAAGAGTTCTTTATAGTTATTGGGATTGTTGCAGGGTATACACTAGGTAGcttgttggtagacactgttgCTGGGTGGCGGTATATGTTTGGAATCAGTAGTCCTGTTGCAGTAATAATGGGATTTGGAATGTGGTGGCTCCCAGCTTCTCCTAGATGGCTACTTTTACGTGCTATACAGGGAAAAGGGGATCTTCAGAATTTGAAAGACACAGCGATTAGTAGTTTGTGCCGGCTTCAAGGTCCAACGTTTCATGATTCTGCTTCTCAGCAAGTGGATGAGATTATGGCAGAGCTTTCTTATATAGGTGTAGAAAATGAGGTTACTTTTGTAGAAATGTTTCGTGGAAAATGCCGGAAGGCCCTTGTGATTAGTGCAGGattggtcttgtttcaacagATCACAGGGCAACCAAGTGTTCTCTACTACGCTGCATCAATCCTTCAGAGTGCAGGATTCTCCTTAGCAGCTGATGCTACCCGGGTCTCTATTCTCCTTGGTGTATTTAAGTTGATTATGACTGGAGTGGCTGTTGTCGTCGTTGATAGACTTGGAAGGAGACCTTTACTACTTGGAGGAGTTTCAGGAATAGTGATCTCGTTATTCTTACTGGGTTCATACTACATATTCTTGGATAATGCTGCAGTTCTTGCTGTAGTTGGTCTGCTACTCTATGTTGGTTGTTATCAGATTTCCTTTGGTCCAATGGGTTGGCTTATGATAGCCGAGATTTTTCCGTTGCGCCTGAGAGGTCGAGGACTTAGTATAGCAGTTCTTGTCAATTTTGCGGCAAATTCCCTGGTTACATTTGCCTTTTCCCCGCTGAAGGATTTACTGGGAGCAGGAATTTTGTTTTACATATTTTGTGCAATAGCCGTGGCGTCGCTTGTATTCATATACTTCATTGTACCAGAAACCAAGGGGCTTACACTAGAGGAAATTGAGGCAAAATGTCTGTGA 1506 0.4203 MASDAEQPPLSSLSKEGKSPADDRSERERLLNGFHGSQDYSISAAILPFLFPAFGGLLFGYDIGATSSATISIQSPSQSGITWYDLDSVEIGLLTSGSLYGALIGSVLAFNVADFLGRRRELLVAALMYLGGALITAFAPNYPVLVIGRLVFGIGIGLAMHAAPMYIAETAPTPIRGQLISLKEFFIVIGIVAGYTLGSLLVDTVAGWRYMFGISSPVAVIMGFGMWWLPASPRWLLLRAIQGKGDLQNLKDTAISSLCRLQGPTFHDSASQQVDEIMAELSYIGVENEVTFVEMFRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLAADATRVSILLGVFKLIMTGVAVVVVDRLGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQISFGPMGWLMIAEIFPLRLRGRGLSIAVLVNFAANSLVTFAFSPLKDLLGAGILFYIFCAIAVASLVFIYFIVPETKGLTLEEIEAKCL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02870 501 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 489 IPR020846 GO:0022857
Tsu02g02870 501 ProSitePatterns Sugar transport proteins signature 1. 109 126 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g02870 501 Pfam Sugar (and other) transporter 51 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu02g02870 501 ProSitePatterns Sugar transport proteins signature 1. 359 375 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g02870 501 PRINTS Sugar transporter signature 314 324 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02870 501 PRINTS Sugar transporter signature 424 436 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02870 501 PRINTS Sugar transporter signature 401 422 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02870 501 PRINTS Sugar transporter signature 146 165 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02870 501 PRINTS Sugar transporter signature 56 66 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02870 501 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 1 4 501 - -
Tsu02g02870 501 CDD MFS_GLUT10_12_Class3_like 51 496 - -
Tsu02g02870 501 ProSitePatterns Sugar transport proteins signature 2. 151 176 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g02870 501 SUPERFAMILY MFS general substrate transporter 49 497 IPR036259 -
Tsu02g02870 501 MobiDBLite consensus disorder prediction 1 26 - -
Tsu02g02870 501 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 4 501 - -
Tsu02g02870 501 TIGRFAM SP: MFS transporter, sugar porter (SP) family 42 496 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02870 501 Gene3D MFS general substrate transporter like domains 39 499 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02870 Tsu-Chr2 31370135 31378545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02870 1 501 Organic Solute Cotransporters AT5G17010 71.968 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02870 - - lja:Lj3g3v3639770.1 794.267