Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02848 ATGAGTGAGAATTTGAAGGGAAAAGTCAATGCCATTGGAGAGCGTCTCAAAATCAATGGAGCTGAAATGGGTAGAAAGATGAGTGCTGGAATGAGTACTATGAGCTTTAAGATGAAAGAGTTTTTCCAAGAACCAAACCAAGCTGATAAACTTGTTGCTGATGCTACTTCTGATTCACTTGATTACACTAATTGGGATATCATTCTTCatctttgtgatttgattaATGCTGAAAAAATTGATACTTGTGATGTTGTACGTGCCATAAAGAAAAGGATTATGATGAAAAGTCCTAGAGGTCAGTACTTGGCTTTGGTTTTGCTTGAAATGGTGGTCAAGAATTGTGACAAGGGTTTCTTTGAGGTTGCTACTGAGAGAGTTCTTGATGAAATGGTTAAGATTGTCGATGATCCTGATCAGAGTTTTGTTGCTAGTAAGGAAAAGACTTTGATGATGATTCGCGATTGGGGAGAGTCGACTACTGAGCTTCGGTATCTCCCTGTTTATGAAGAAACTTACAAGAGTTTGAAATCAAGGGGCATTAGGTTCCCCGATCGTTTCAATGAAAGCAAGGCTCCTGTTTCTACTCCTTCTAGCTCTGCCTCTGCACCAGTGGCAGATCTCAGTTTTGAATATCTTATTGACCACGATACTCGGCCTGATCTCACTCTTGCAAAAATTATTCAGCGCGAAAATCTTGTGCCAAGTTTTACATCTCAACAAACAAAGGAAGCATTTGTTGTTGCAAGAAATATCATTCACCTTCTCTCTTCCGTGTTGCACAAAGATGCTCTCAAgCAAGATTTGACCATCACATTACTACAACAGTGCCGTGAGTCCCAATCTACAATCCACAAAATCATTGAGACAGTTGGAAATAATGAAGCACTGCTATTTGAGGCCTTGAATGTAAATGATGAGATTCATAAGGTTCTCTCCAAATATgaagagttgaagaagaagcCTAAAGTTTCTCCGCTTGAACCAGAACCGAATATGACAATACCTGTTGCTATTGAGCCAGATGAATCCCCTCACTTTAGAGAAGAGACCttgataagaaaatcaaattgttcAAGAACTGGAGTTCAAGGATTGAGCCATGATGACATGATGGATGATCTTGATGAAATGATTTTTGGCAAAAAAGGTGGAGATGCATCTCAATGGGGACAAGATCCTAAGAACCAACAACAATCATCAAAATATGACTTCATTTCCTTATAA 1227 0.3749 MSENLKGKVNAIGERLKINGAEMGRKMSAGMSTMSFKMKEFFQEPNQADKLVADATSDSLDYTNWDIILHLCDLINAEKIDTCDVVRAIKKRIMMKSPRGQYLALVLLEMVVKNCDKGFFEVATERVLDEMVKIVDDPDQSFVASKEKTLMMIRDWGESTTELRYLPVYEETYKSLKSRGIRFPDRFNESKAPVSTPSSSASAPVADLSFEYLIDHDTRPDLTLAKIIQRENLVPSFTSQQTKEAFVVARNIIHLLSSVLHKDALKQDLTITLLQQCRESQSTIHKIIETVGNNEALLFEALNVNDEIHKVLSKYEELKKKPKVSPLEPEPNMTIPVAIEPDESPHFREETLIRKSNCSRTGVQGLSHDDMMDDLDEMIFGKKGGDASQWGQDPKNQQQSSKYDFISL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02848 408 MobiDBLite consensus disorder prediction 379 408 - -
Tsu02g02848 408 Pfam VHS domain 46 180 IPR002014 GO:0035091|GO:0043130
Tsu02g02848 408 ProSiteProfiles VHS domain profile. 55 184 IPR002014 GO:0035091|GO:0043130
Tsu02g02848 408 Gene3D - 39 203 IPR008942 -
Tsu02g02848 408 PANTHER TOM1-LIKE PROTEIN 1 1 407 - -
Tsu02g02848 408 Gene3D - 241 327 IPR038425 -
Tsu02g02848 408 SMART VHS_2 48 180 IPR002014 GO:0035091|GO:0043130
Tsu02g02848 408 Pfam GAT domain 255 320 IPR004152 GO:0035091|GO:0043130
Tsu02g02848 408 SUPERFAMILY ENTH/VHS domain 42 184 IPR008942 -
Tsu02g02848 408 ProSiteProfiles GAT domain profile. 229 320 IPR004152 GO:0035091|GO:0043130
Tsu02g02848 408 Coils Coil 301 321 - -
Tsu02g02848 408 MobiDBLite consensus disorder prediction 390 408 - -
Tsu02g02848 408 SUPERFAMILY GAT-like domain 182 320 - -
Tsu02g02848 408 CDD VHS 48 178 - -
Tsu02g02848 408 PANTHER TOM1-LIKE PROTEIN 1 1 407 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02848 Tsu-Chr2 30869187 30871688 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02848 - - ccaj:109799203 483.796