Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02830 ATGGCTTCAAAATCTAGTACTACTAGATCAAAACTATCAGAGAATTTGAACAAAGCATCACAGGCAACACCAAGAGTAAGTAAAGTTAGCAAAGTAGTGTCTAAATCCGAATCTGATTCGCCGTCTCCTTTGCAAAGTTCGCGTCTTCCTGTGGAGAGATCACCGCGATCTGTGAATTCAAAGCCTGCGGTTGAGCGGAAATCAGCCAAAGCTACCTCCACACCACCTGATaaacaagccccaagagctgCAAAGGGTTCAGAATTGCAGAACCAGTTGAATGTAGCTCAAGAAGATCTAAAGAAAGCAAAGGAGCAGATCCTTCAGGCTGAGAAGGAGAAGGTAAAAGCTATTGATGAGTTGAAAGAAGCACAGAGAGTGGCCGAGGAAGCAAATGAGAAGCTCAAGGAAGCATTGGTGGCTCAAAAGCAGGCTAAGGAGGAAACTGAGATTGAAAAATTCCGATCTGTTGAATTGGAACAGGCTGGAGTTGAaactgtgaagaagaaggaagaagaatgGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCCTTGGATGTGGCTGCTCTTGCATCCACGACCGAGGAGCTTCAGCGGGTTAAACAAGAACTCACCATGACTTGTGATGCTAAGGACGAGGCATTGAATCATGCTGATGATGCAGCTAAAGTTGCCGAGGTTCATGCTGAGAAGGCAGAAACTTATGCAGCTGAATTGACGCAATTGAAGGCCTTACTAGAttcaaaagaagaaacaaaagcTAGTGATAATAACCTTATATTGAAGTTGAAAGCAGAGATAGAAGCTCTCAAGCAAGAACTCAATAAGGGAATGAGTTATGATGAGAAGTTGACAGAGAAAGAAACTCAGATTGAACAGCTTAATGTAGAACTTGAAACCTCAAGGATGGCTGAATCTTATGCTCATAGTCTGCTAGAAGAATGGAAGAAGAAGGTCGAGGAACTAGAAATGAAGGCTGAAGAGTCAAACAGATTGGAGCGATCTGCATCAGAATCTTTGGAATCTGTAATGAAACAGCTAGAAGAAAGCAATGAATTGTTGCATGATTCAGAATCTGTAGTTTCTTCTCTTAAAGAGAAGGTGGGATTGTTAGAAATGACAATTGCAAGACAAAAAGCCGATGTTGAGGATTCAGAACGTCGCCTTCTTACGGTTAAGGAAGAAAATCTTGATCTTTCAAAGATGGTTGAGTCTCTCAAATCTGAACTTGAGACAGTGAAGGAAGAGAAAGATCAGGCTTTGAACAATGAACACCTTGCAGCCTCTAGTGTGCAGACTCTTCTagaagagaaaaacaaactTATCAATGAATTGGAGAATTCtagggaagaagaagaaaaaagcaaaaaggCAATGGAAAGCTTGGCTTCTGCATTACATGAAGTATCTGCTGAATCTAGAGAAGCCAAAGAGAATTTTCTAATCAACCAAGCTGAAAGGGAAAGCTATGAGACCCAGATAGAAGATTTAAAGTTAGTCTTAAAAGGTACTAATGAAAAATACGAGTCCATGCTTGATGAAGCACGGCATGAAATTGATGTTCTTATATACAGTATTGAAAACTCTAAGAATGTCTTTGAGAACTCGAAGGCTGAATGGGAGCAGAGAGAGCTTCATCTAGTCAGCAGCCAGAAAAAAACCGAAGAAGAAAACGTGGCTGcggaaaaagaaataaatagatTGGTTAATTTACTTAAACAAACTGAGGAAGAAGCTAATGCCAACAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGACCGAGACTATCCACCTGCAGGAGGCTCTTAAGGAAGTAACGGCTCAGAACATGAAATTGAAGGAGAGTTTATTGgataaagaaaatgaaatgcaGAATGTTTTTCAAGAAAATGATGAACTCCGAGCTAGGGAAGCCGAATCTAATAAGAAGGTTGAGGAGTTGTCTAAGTTGTTGGAAGAAGCTACTGCCAGAAACCATGCCAACCATGAAAACGGTGATCTTTCTGACAGTGAGAAGGACTACGATTTGCTTCCGAAAGTAGTTGAATTTTCTGAAGAGAATGGTCATGGATATGGAGGAGAGGAAATTCCAAAGGTTGAATTTTCCTTCAACCAGGAAGGACTCAAACATAGCTTACAAGAAGAAAGTACGATCTTGAATGACAAAGCTGATGAGAAAATCGAATCTCCGAAACCTGTCAATGTGAATGGAAAACCAAAGGAAGATGAGAACAAAGAAAAGGATGATCCCGAAGAAGTAGAATTCAAAATGTGGGAGAGCTGCACAATAGAGAAAAAAGAGTTCTCATTCTCCCCAGAAAGAGAACTTTCACTTCCAGAGGCAGAATCATTTGAAGAGAAAACTGAGTCAAAGATAGAAGAAGGTGATGGTGAAAGCTTTGATAAGATAAATGGAACCACTGTAATAGAGAACATTGATAATGGTGGAAGCTCACCATTGaaagaagaacaacaacaattgaagaagaaaaagaaacctTTGCTTGGAAAATTTGGAAGTTTGCTCAAGAAAAAAGGTGGTAGCAACCAGAAATAG 2577 0.3787 MASKSSTTRSKLSENLNKASQATPRVSKVSKVVSKSESDSPSPLQSSRLPVERSPRSVNSKPAVERKSAKATSTPPDKQAPRAAKGSELQNQLNVAQEDLKKAKEQILQAEKEKVKAIDELKEAQRVAEEANEKLKEALVAQKQAKEETEIEKFRSVELEQAGVETVKKKEEEWQKELESVRNQHALDVAALASTTEELQRVKQELTMTCDAKDEALNHADDAAKVAEVHAEKAETYAAELTQLKALLDSKEETKASDNNLILKLKAEIEALKQELNKGMSYDEKLTEKETQIEQLNVELETSRMAESYAHSLLEEWKKKVEELEMKAEESNRLERSASESLESVMKQLEESNELLHDSESVVSSLKEKVGLLEMTIARQKADVEDSERRLLTVKEENLDLSKMVESLKSELETVKEEKDQALNNEHLAASSVQTLLEEKNKLINELENSREEEEKSKKAMESLASALHEVSAESREAKENFLINQAERESYETQIEDLKLVLKGTNEKYESMLDEARHEIDVLIYSIENSKNVFENSKAEWEQRELHLVSSQKKTEEENVAAEKEINRLVNLLKQTEEEANANREEEAQLKENLKEVETETIHLQEALKEVTAQNMKLKESLLDKENEMQNVFQENDELRAREAESNKKVEELSKLLEEATARNHANHENGDLSDSEKDYDLLPKVVEFSEENGHGYGGEEIPKVEFSFNQEGLKHSLQEESTILNDKADEKIESPKPVNVNGKPKEDENKEKDDPEEVEFKMWESCTIEKKEFSFSPERELSLPEAESFEEKTESKIEEGDGESFDKINGTTVIENIDNGGSSPLKEEQQQLKKKKKPLLGKFGSLLKKKGGSNQK 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02830 858 MobiDBLite consensus disorder prediction 776 807 - -
Tsu02g02830 858 PANTHER WEB FAMILY PROTEIN-RELATED 15 856 - -
Tsu02g02830 858 MobiDBLite consensus disorder prediction 811 829 - -
Tsu02g02830 858 Coils Coil 553 664 - -
Tsu02g02830 858 MobiDBLite consensus disorder prediction 1 92 - -
Tsu02g02830 858 Coils Coil 286 306 - -
Tsu02g02830 858 Coils Coil 314 334 - -
Tsu02g02830 858 Coils Coil 86 152 - -
Tsu02g02830 858 Coils Coil 234 275 - -
Tsu02g02830 858 Coils Coil 489 516 - -
Tsu02g02830 858 Coils Coil 164 184 - -
Tsu02g02830 858 Coils Coil 349 369 - -
Tsu02g02830 858 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 15 856 - -
Tsu02g02830 858 MobiDBLite consensus disorder prediction 722 761 - -
Tsu02g02830 858 Pfam Weak chloroplast movement under blue light 87 649 IPR008545 -
Tsu02g02830 858 MobiDBLite consensus disorder prediction 776 858 - -
Tsu02g02830 858 MobiDBLite consensus disorder prediction 1 54 - -
Tsu02g02830 858 MobiDBLite consensus disorder prediction 721 761 - -
Tsu02g02830 858 Coils Coil 430 481 - -
Tsu02g02830 858 Coils Coil 377 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02830 Tsu-Chr2 30658576 30662976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02830 - - gmx:100808226 1053.89