Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02819 ATGAATTTCAACAACATGAAAGTTCCAAAGGTTCCTGGTGGTGGTGGAATCTCTGCTTTGCTTAAAGTTAGTATTCTCGGTGGACTTGCTGTTTATGGGGCTACAAACACTTTGTACAATGTTGAGGGTGGTCACCGTGCTATTGTTTTTAACCGTCTTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATATTATGATCCCGTGGTTTGAGAGGCCTGTGATCTATGATGTTCGTGCACGACCTCATTTAGTGGAGAGCACTTCAGGAAGCCGTGATCTCCAAATGGTGAAAATTGGACTTAGAGTTCTTACTCGTCCTGTGCCAGACCAATTACCAACAGTTTATCGTACTCTGGGTGAGAATTATAATGAAAGGGTTCTGCCTTCTATCATACACGAAACTCTCAAAGCTGTGGTTGCACAGTACAACGCCAGTCAGCTCATTACTCAGAGAGAGGCTGTTAGTCGTGAGATAAGGAAGATATTGACTGAAAGGGCTTCCCAATTTAACATTGCATTGGATGATGTATCAATCACAAGTTTGACATTTGGGAGGGAATTCACGGCTGCAATTGAAGCCAAGCAGGTTGCTGCTCAAGAAGCAGAGAGAGCGAAATTTGTTGTAGAAAAAGCTGAACAAGACAAAAGAAGTGCTGTTATTAGAGCACAGGGAGAAGCCAAGAGTGCTCAATTGATTGGTCAAGCTATTGCCAACAACCCTGCATTTATAACCTTGAGGAAAATTGAAGCTGCTAGGGAAATCGCTCAAACAATTTCAAATTCTGCCAACAAGGTTTACTTGAATTCAAATGATCTCTTGTTGAATCTTCAGGATTTAAATTTGGAGCCCAGTGGGAAGAAATAG 873 0.4192 MNFNNMKVPKVPGGGGISALLKVSILGGLAVYGATNTLYNVEGGHRAIVFNRLVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISNSANKVYLNSNDLLLNLQDLNLEPSGKK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02819 290 SUPERFAMILY Band 7/SPFH domain 69 205 IPR036013 -
Tsu02g02819 290 PANTHER PROHIBITIN 1 290 IPR000163 GO:0016020
Tsu02g02819 290 Pfam SPFH domain / Band 7 family 40 215 IPR001107 -
Tsu02g02819 290 SMART PHB_4 37 198 IPR001107 -
Tsu02g02819 290 Coils Coil 197 217 - -
Tsu02g02819 290 CDD SPFH_prohibitin 38 232 IPR000163 GO:0016020
Tsu02g02819 290 PRINTS Prohibitin signature 145 161 IPR000163 GO:0016020
Tsu02g02819 290 PRINTS Prohibitin signature 168 187 IPR000163 GO:0016020
Tsu02g02819 290 PRINTS Prohibitin signature 216 232 IPR000163 GO:0016020
Tsu02g02819 290 PRINTS Prohibitin signature 99 118 IPR000163 GO:0016020
Tsu02g02819 290 PRINTS Prohibitin signature 122 140 IPR000163 GO:0016020
Tsu02g02819 290 PRINTS Prohibitin signature 81 97 IPR000163 GO:0016020
Tsu02g02819 290 PRINTS Prohibitin signature 193 216 IPR000163 GO:0016020
Tsu02g02819 290 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 1 290 - -
Tsu02g02819 290 Gene3D Band 7 domain 66 200 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02819 Tsu-Chr2 30569724 30575732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02819 K17081 - gmx:100811958 511.146