Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02807 ATGGATTGCGCCATTGGATCGATCGTATGGGTTCGCCGGCGAAACGGGTCTTGGTGGCCGGGTCAAATACTTGGCGCCGATAATATGTCCACTTCTCATCTCACTTCTCCTCGTTCAGGAACTCCGGTTAAGCTTCTTGGCAGAGAAGACGCTAGCGTAGATTGGTATAATTTGGAGAAATCCAAGCGTGTAAAGGCATTCCGTTGTGGCGAGTTTGATGATTGTATTTTAAAGGTTGAATCATCTCATGAGATGCCGttgaagaaaagagagaaatatgcTCGGCGTGAAGATGCCATTCTTCATGCTCTTGAACTTGAGAGGCAATTGGTGaataaacaagcaaaaataGCCAATGTTTCCAATCGAACCGAGTGTAGATTGTCTAGTTTGGTTAAAAAGGGTGTGGTTGTGTTGCCGGTGGAAACCCtgggaaatgatgatgatgatgaaaaaaaatatgcaaatttgAAATCATATGCGTCTTGTGAGAATGAAATTGCCGGAGGTTGTTTTCCTTTGGAGGTAGCCAGCGATGTGGAAGTAGATCTCTCTGAAGTGACTCCTCGGACGAGAGACTTGCAGGATTTTGGACTCAAAATTCCACCATTGAAAGGGAACTTCTCATCTCCCGTGGATCCACATGTTTCAAAGAGAATTTCAGTTGACGAGGGTGCTCAGGCTCTTGCAAGTGGTAGTCTTTGCACAGGGAGTGCACTCCAGGAAAATGGAGCAAGGCAAATAGCATACAGTACAAAGAGGAGCAGGTATTTTTATTTGCCAGCCGAGTCTGGTGATTATCTTGACTACAAAGAGAGACTAGCCCTTGTTGACACGCCATCTCCAAAATTTGGAGGACAGTTTCCTTATCGTGGTTCTCTGGATGGAGAGACTGAATCAACATTGATGGATGATGTTGAATCTGGCTCTACAGAAACAGACTACACCGTCTCTGATTCAGATTCTTCTGAGACAGAACCTGACATGAATGTAAAGATGACTATACTCACAGAAACTGGCCGGGATTTTGAAGAACATGAAAGCACAAGTAGTGAGGAGCCCGATGAATTAGCAGTCACCAGTGACATGCCTCACCTTTATCCTCGCGAACTGATAACATGCAATGAAGCCATGTCTAAATGGCAACTAAAAGGGAAAAGGAATAACCGGAATCTTGTAAAGAGGTCTTATGGCGCCCCTGATGGAAAAGGTATTATATATGGAGCAGAAGTGGATTTTGAAGAAGAGAGAACTAATTCAAGTCACAAGAGAATGGGTTCAAGTTTAGATTGCTACAGAAATGATTTTGGTGATGCACTTTATGACGATGATCAAATGTTTGGATTGGAAGATGAATATTCTCCCACTCCTAGAGCTGTATCAAAAATTCAGAATGGAATTCATCGTCGTGTGGATGACTTGGCCTGGGATGAACATCTTGCTTCAAAAGAATATTGGGATATTAAGGGAGTTACTCCAAcatatgatgatgattatcATGTTGGTGGGAGGATGAGGTCGATGCTGATTAATGTATATGTGGAGGTTCAAGCAGGATATCGGAAGGAGCCTGTGCCCATTATTTCTCTCATGAGTAAGTTAGATGGAAAGGCAATAATAGGGCACCCAATCCAGGTTGAGGTCCTTAAGGATGGTTCTTCTGAAACTCTCTTTGCAATTGATGACTTCAGTAATGATGGGATTGGTATTGAAGGATATAGTGTGCTTCCACAAGCATGGAGGACTGCAAGGAGAACAGCAAATTTCCGTATCCCTCGCCCCCATGTTTTGTCATCAACTGGTGCTGAAGTTGCTGTTGACTTTCCCTCTTTAGATAAAGAACAAAACTTCGattataaaaaactaaacacTGGAAGTTCCATTCATAAGGCAAGCCTTCAAAAAAAGAGTCGCGacaaaaagttttttaaaaaggtGCCAAAGAAGTTGAGCCTGTCATCTAACCAGAAAATTAGAACTCTGTCCTCATTATCTACTAAACACAGTCTTAGAAATCCATTGCATGATATCAGTAGCTTTCAAACAGGTAGATTAATTAAACCAGAAATCTCTGGTCCCCCCACAGTAGCTTGCATACCAGTCCAATTAGTTTTTAGTAGATTACTTGAAAAGATTAACAGGCCTCCATCAAAAGTAGGTAGTAATGCAGCTTTGCTGAATACTGGTGTGGAGAGAAATTCTTAG 2205 0.4041 MDCAIGSIVWVRRRNGSWWPGQILGADNMSTSHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCILKVESSHEMPLKKREKYARREDAILHALELERQLVNKQAKIANVSNRTECRLSSLVKKGVVVLPVETLGNDDDDEKKYANLKSYASCENEIAGGCFPLEVASDVEVDLSEVTPRTRDLQDFGLKIPPLKGNFSSPVDPHVSKRISVDEGAQALASGSLCTGSALQENGARQIAYSTKRSRYFYLPAESGDYLDYKERLALVDTPSPKFGGQFPYRGSLDGETESTLMDDVESGSTETDYTVSDSDSSETEPDMNVKMTILTETGRDFEEHESTSSEEPDELAVTSDMPHLYPRELITCNEAMSKWQLKGKRNNRNLVKRSYGAPDGKGIIYGAEVDFEEERTNSSHKRMGSSLDCYRNDFGDALYDDDQMFGLEDEYSPTPRAVSKIQNGIHRRVDDLAWDEHLASKEYWDIKGVTPTYDDDYHVGGRMRSMLINVYVEVQAGYRKEPVPIISLMSKLDGKAIIGHPIQVEVLKDGSSETLFAIDDFSNDGIGIEGYSVLPQAWRTARRTANFRIPRPHVLSSTGAEVAVDFPSLDKEQNFDYKKLNTGSSIHKASLQKKSRDKKFFKKVPKKLSLSSNQKIRTLSSLSTKHSLRNPLHDISSFQTGRLIKPEISGPPTVACIPVQLVFSRLLEKINRPPSKVGSNAALLNTGVERNS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02807 734 Pfam PWWP domain 6 86 IPR000313 -
Tsu02g02807 734 Gene3D - 1 119 - -
Tsu02g02807 734 ProSiteProfiles PWWP domain profile. 5 60 IPR000313 -
Tsu02g02807 734 PANTHER T17B22.17 PROTEIN-RELATED 2 121 IPR044679 -
Tsu02g02807 734 PANTHER T17B22.17 PROTEIN-RELATED 248 732 IPR044679 -
Tsu02g02807 734 MobiDBLite consensus disorder prediction 287 328 - -
Tsu02g02807 734 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 121 - -
Tsu02g02807 734 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 248 732 - -
Tsu02g02807 734 MobiDBLite consensus disorder prediction 303 328 - -
Tsu02g02807 734 SUPERFAMILY Tudor/PWWP/MBT 4 109 - -
Tsu02g02807 734 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02807 Tsu-Chr2 30367065 30371521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02807 - - aprc:113864977 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02807 02 30367065 30371521 Tsu02g02807 02 30367065 30371521 ECH