Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02779 ATGTCTTCCATTATGCTGCTTATTGGAGTATTAGTATCTTCTATTGCGTTACAATTCATGGGTGCACAATCCATAGGTGTTTGTTatggaggaaatggaaataATCTACCAACAAAGCAAGCAGTAGTTGATTTATACAAATCAAAAGGAATTGGTAAAATCCGTCTATATAATCCAGATGAAGGAATACTCCAAGCCCTAAGAGGCTCAAACATAGAAGTAATCCTCGGCGTCCCAAACAACAACCTCAACTCACTCACGAATGCCCAAGCCGCCAGCGATTGGGTCAACAAATATGTAAAAGCCTATTCAAACGTCAAAATCAAATACATTGCCGTTGGCAACGAAGTTCACCCCGGTTCAGCCGAAGCCAATTCAGTTCTTTCCGCATTGCAAAACATTCAAAAAGCTATATCTGCAGCAAATTTACAAGGCCAAATTAAAGTGTCTACCGCGATAGATACAACTCTAATTGGAAAATCTTACCCACCAAACGACGGTGCATTTAGCGATAGTGCAAGTGGTTACATAAGGCCTATTGTTAACTTCTTAGTTAGCAACGGTTCACCACTTCTTGCTAATGTGTATCCTTATTTCTCATATATTGGTAACCAACAAAGCATTGGTCTTGACTATGCTTTGTTTACAAAACAAGGGAAAAATGAAGTTGGTTACCAAAATTTATTTGATGCAATATTGGATTCAATTTATGCTGCTCTTGAGAAAGTAGGAGGTTCTAATGTGAAAATTGTTGTGTCTGAGAGTGGATGGCCATCTGAAGGTGGAACTGCAGCTAGTGTTGGAAATGCTCAAACATATTATGGAAATTTGATTAATCATGCTAAGGGTGGAACTCCAAAGAGGCCTAATGGACCTATTGATACATATCTTTTTGCTATGTTTGATGAAAATCAGAAGACTGGTGATGAAATTGAGAGACACTTTGGTCTCTTTAGACCTGACAAATCTCAAAAGTATCAGATCAGTTTCAATTGA 996 0.3755 MSSIMLLIGVLVSSIALQFMGAQSIGVCYGGNGNNLPTKQAVVDLYKSKGIGKIRLYNPDEGILQALRGSNIEVILGVPNNNLNSLTNAQAASDWVNKYVKAYSNVKIKYIAVGNEVHPGSAEANSVLSALQNIQKAISAANLQGQIKVSTAIDTTLIGKSYPPNDGAFSDSASGYIRPIVNFLVSNGSPLLANVYPYFSYIGNQQSIGLDYALFTKQGKNEVGYQNLFDAILDSIYAALEKVGGSNVKIVVSESGWPSEGGTAASVGNAQTYYGNLINHAKGGTPKRPNGPIDTYLFAMFDENQKTGDEIERHFGLFRPDKSQKYQISFN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02779 331 Pfam Glycosyl hydrolases family 17 25 330 IPR000490 GO:0004553|GO:0005975
Tsu02g02779 331 Gene3D Glycosidases 23 331 - -
Tsu02g02779 331 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 328 IPR044965 GO:0004553|GO:0005975
Tsu02g02779 331 PANTHER GLYCOSIDE HYDROLASE FAMILY 17 PROTEIN 17 328 - -
Tsu02g02779 331 SUPERFAMILY (Trans)glycosidases 25 330 IPR017853 -
Tsu02g02779 331 ProSitePatterns Glycosyl hydrolases family 17 signature. 248 261 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02779 Tsu-Chr2 29791200 29793681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02779 25 331 Glycoside Hydrolase AT3G57240 51.911 1.76e-108 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02779 - - gmx:547748 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02779 02 29791200 29793681 Tsu02g02779 02 29791200 29793681 ECH