Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02778 ATGGAACCGTTAAACGGCGCCGGTGACGATAGGTTTTCGAACGCAAACTCCGGTTCCACGTCAGCTTTCACCTTCACCACCGCCCCTTCCGTTTCTTCCGGCCTTTCAAAGCCAAGATTCGTTAAGCTTCGTAAACACAACAATGCCTCCGCCTTCAATCGCGACGGTTTTATCGCCAATGCCGCCGTAACCGTCGTCGGATCCAATAAGCTTGATTCCGGTTTGAATTTTGATAAGCGGATTAGTGATCGATTAATGAATCTCAAAATCGGAAGCGAGGGTTTCGTTAACGCTGATGGAACCTTGCTTCCGGAAGAGATGAATAAGTTGAAGATTGTAACGGAAAATAAAGGTTTTGATAAGGTTCGTGTTGAATCGGAACTCGGGAACGAGTTGAAGAAGAAACTCAGCTTTAAAGAAGGTAACAATGTAGTTAGTGATGAAAACTCGGCGAATTCGGTTATTCAGCAATTGAATAATTTGAATGTGAATGATGCAATGAGCAAGAAGTTTAACCTAGTTGACCAGAATGTTGAACCTAATTTATGCAATCCTTCTGCAAtgccatcatcatcatcagtaTCAGGTTCGGGTTCAGGTTCGGCTTCGGTGTTATTTCGACCTTTTGAAGTAAATAAGAAGGATGAATTTGTCTTTCAGAGTAAACCAGAAGCTTCAGGTTCAGCTTTTGTCGAGTTTAAAACGCACGGACCGAAGATTGGtggaaaagaaggaaaaatgaaagaaaaaagtgGCAATGTGAGAATGAATAAAAGTAGAGTTAATTTGAAGCATTCTACACCGGTACATGTACAACCTTGGAATGCTcatggttttatttttaaaggagTTGTTTCGCAACAAGATCAACCTCAGGGTTCGCCAGAGACTTGTTCGCCAATGGAGGTCTCACCTTATCAGGAGAAACTGGCTGAGAAACAAACCTTGAGGGAGAATTCTGTGACATCCAACGAGTCATTTGGTGTCGATGATAATGGTAATGATAATGTAGCTATGAGTTTTGCTGATCgcattgatgaagatttgattgGGGCAACTCAGAGCATGAATataaatgagagtattgaagtTACGCGTGAAGATACAAGGGAGGGGAAATCAGAGTGTGATGTACATGAAAATatttatgttgatgaagagACGAAGGATGAGTCTGTTTCTGGGGTTGAAACTGAAAGCTTTAAATCTGCTAGTGAAAGTGTGGACCAAACTAATGATGATGCAGAAACTGAAGCCTGTGATGGTGATGGAATGTTGAATTTTGGTTGTAGTTTTAGTTCGAGAAATGAAAGTGTGAGTGGGTCTGGCTTCACCTTTGCTGCTGCTTCTTCTGCTGAAGCTCAATTGTCTAGCCCAAAACGccataacaaaaagaaaacttggGTAAATGTTGGTAATGATTCTTACAACTACGCGCCAAATATAAAGGTTCCttattcttcatcatcatccgTGCCATTTGCAGAGGTTTATGAAAAGTCTCTTGCTGCTTCGGTGCCCCACATAAAAACTAAAGTGTCTTTTCCTCAACCCAAAACTAGAGGCTCTGATGTGAATGAGAAGCACGGGATAAGGGAGGCTTCTGATTCTGTTTCTGCTGAAGCATGTGAAAAGTGGCGCCTCCGAGGAAACCAAGCCTACAAGAACGGGGATTTGCCTATGGCCGAGAATTGTTACAAACAAGGGCTTGGTTGTATATCTAAAGAACAAGCATCTCGGAGCTGTCTCAGGGCTTTGTTGCTATGTTATAGCAACCTGGCTGCCACACACATGTCTCTTGGTAGGATGAGAGATGCAATAGAAGATTGTAGGCTAGCTGCTGAAATAGATCAAAACTTTCTCAAGGTGCAACTTAGAGCTGCAAATTGTTATCTTGCTCTGGGAGAAGTTGAAGGTGCATCACAATATTTCAAAAGGTGCTTGCAACCAGGAACTGATGTTTCTGTAGATCGAAAAATTGCTGTGGAAGCCTCTGATGGCTTACAAAAGGCACAGAAAGTATCAGATTTCATGTATCATTCTGCTGAGCTTTTGCAAAGAAGAACATCCTCAGATACAGAGAGAGCACTGGAACATATTAATGAGGCATTGGTGATCAGTATGTACTCTGAAAAATTGCTTGAAATGAAAGCAGAGGCTCTTTCAATGCTGTGTAGATATGAAGAGGTGATTCATCTGTGCGACGAGACCTTTAGCTCTGCTGAGAAGAATGCTTGTCCAATGGCTGCTGGTTGCCAAGTCACATTTCTGGATGATTCAGAACTCTCAAAAGTCATCTACTTCAGACTATGGAGGTGTTCAATAATGCTTAAAACCTACTTTCACTTAGGCAAGCTTGAAGAAGGTCTTTCTTTGCTGGAACAACAAGAGGAAAAGGTGTCTGCCATAAACAAGAGTGGAAGCAAGGTTTTGGATTCACTTATACCACTAGCCGCCACTGTACGCGAGCTCTTGCATCATAAGACTGCAGGGAATGAAGCATATCAGGCTGGAAGACACGCTGAAGCTGTTGAACACTATACCTCTGTTTTATCTTGTAATTTGGAGTCTCGTCCATTTGCAGCTGTCTGTTATTGCAATCGTGCCGCTGCATATAAAGTGTTAGGTCAAATAACTGATGCTATCGCAGATTGCAGTCTGGCTATAGCTCTTGATGGAAATTATTTGAAGGCACTTTCTAGACGTGCAAGTTTGTATGAGATGATTAGAGATTATTCCCAAGCAGCCAATGATCTTAGGAgacttctctctcttctcagTAAGGGGATAGAGGACAATGCCAATCATAAAGGAACATCTGATAGAACAATTAATTATACCAATGATTTGAAACAATATCGCATTCGACTCTCCGAGCTAGAGGAAGAAGACAGAAAGGAGATCCCTCTTGATATGTATCTTATTTTGGGGGTTGAACCATCTGTTTCAATATCTGAAATCAAGAAGGCCTATCGCAAAGCTGCACTTAGACATCATCCGGACAAGgCTTGCCAATCTTTGACAAAAAATGACCATGTAGATGATGGGATATGGAGGGTTATTGCTGAGGAAGTACATAGAGATGCTGATAGGCTTTTCAAAATAATTGGGGAGGCATATGCTGTTCTGTCAGACCCTGCAAAgCGGGCACGATATGATGCAGAAGAAGAAATGAGAAATTCCCAAAAGCGACGCCCTGGAACTATGGGTAGAAATAATGTGGAGAATCAGTATTGCTCATCTGAACAATCCAACAGGAGACATTGGAGAGAGGTTTGGAGATCATATGGTAATTCATCTTCTCAAAGTTCTGAAACTGGTCGACCAAGTAGGAGGTAA 3339 0.3986 MEPLNGAGDDRFSNANSGSTSAFTFTTAPSVSSGLSKPRFVKLRKHNNASAFNRDGFIANAAVTVVGSNKLDSGLNFDKRISDRLMNLKIGSEGFVNADGTLLPEEMNKLKIVTENKGFDKVRVESELGNELKKKLSFKEGNNVVSDENSANSVIQQLNNLNVNDAMSKKFNLVDQNVEPNLCNPSAMPSSSSVSGSGSGSASVLFRPFEVNKKDEFVFQSKPEASGSAFVEFKTHGPKIGGKEGKMKEKSGNVRMNKSRVNLKHSTPVHVQPWNAHGFIFKGVVSQQDQPQGSPETCSPMEVSPYQEKLAEKQTLRENSVTSNESFGVDDNGNDNVAMSFADRIDEDLIGATQSMNINESIEVTREDTREGKSECDVHENIYVDEETKDESVSGVETESFKSASESVDQTNDDAETEACDGDGMLNFGCSFSSRNESVSGSGFTFAAASSAEAQLSSPKRHNKKKTWVNVGNDSYNYAPNIKVPYSSSSSVPFAEVYEKSLAASVPHIKTKVSFPQPKTRGSDVNEKHGIREASDSVSAEACEKWRLRGNQAYKNGDLPMAENCYKQGLGCISKEQASRSCLRALLLCYSNLAATHMSLGRMRDAIEDCRLAAEIDQNFLKVQLRAANCYLALGEVEGASQYFKRCLQPGTDVSVDRKIAVEASDGLQKAQKVSDFMYHSAELLQRRTSSDTERALEHINEALVISMYSEKLLEMKAEALSMLCRYEEVIHLCDETFSSAEKNACPMAAGCQVTFLDDSELSKVIYFRLWRCSIMLKTYFHLGKLEEGLSLLEQQEEKVSAINKSGSKVLDSLIPLAATVRELLHHKTAGNEAYQAGRHAEAVEHYTSVLSCNLESRPFAAVCYCNRAAAYKVLGQITDAIADCSLAIALDGNYLKALSRRASLYEMIRDYSQAANDLRRLLSLLSKGIEDNANHKGTSDRTINYTNDLKQYRIRLSELEEEDRKEIPLDMYLILGVEPSVSISEIKKAYRKAALRHHPDKACQSLTKNDHVDDGIWRVIAEEVHRDADRLFKIIGEAYAVLSDPAKRARYDAEEEMRNSQKRRPGTMGRNNVENQYCSSEQSNRRHWREVWRSYGNSSSQSSETGRPSRR 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02778 1112 Pfam DnaJ domain 971 1053 IPR001623 -
Tsu02g02778 1112 PRINTS DnaJ domain signature 991 1006 IPR001623 -
Tsu02g02778 1112 PRINTS DnaJ domain signature 973 991 IPR001623 -
Tsu02g02778 1112 PRINTS DnaJ domain signature 1028 1048 IPR001623 -
Tsu02g02778 1112 ProSiteProfiles dnaJ domain profile. 971 1056 IPR001623 -
Tsu02g02778 1112 SUPERFAMILY TPR-like 827 925 IPR011990 GO:0005515
Tsu02g02778 1112 SUPERFAMILY Chaperone J-domain 930 1052 IPR036869 -
Tsu02g02778 1112 Pfam Tetratricopeptide repeat 590 619 IPR019734 GO:0005515
Tsu02g02778 1112 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 13 1111 - -
Tsu02g02778 1112 SUPERFAMILY TPR-like 544 738 IPR011990 GO:0005515
Tsu02g02778 1112 Coils Coil 943 963 - -
Tsu02g02778 1112 MobiDBLite consensus disorder prediction 1053 1088 - -
Tsu02g02778 1112 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 13 1111 - -
Tsu02g02778 1112 MobiDBLite consensus disorder prediction 1065 1083 - -
Tsu02g02778 1112 Gene3D Tetratricopeptide repeat domain 823 949 IPR011990 GO:0005515
Tsu02g02778 1112 SMART tpr_5 896 929 IPR019734 GO:0005515
Tsu02g02778 1112 SMART tpr_5 862 895 IPR019734 GO:0005515
Tsu02g02778 1112 SMART tpr_5 543 576 IPR019734 GO:0005515
Tsu02g02778 1112 SMART tpr_5 621 654 IPR019734 GO:0005515
Tsu02g02778 1112 SMART tpr_5 587 620 IPR019734 GO:0005515
Tsu02g02778 1112 SMART tpr_5 824 857 IPR019734 GO:0005515
Tsu02g02778 1112 MobiDBLite consensus disorder prediction 388 416 - -
Tsu02g02778 1112 MobiDBLite consensus disorder prediction 1094 1112 - -
Tsu02g02778 1112 Gene3D DnaJ domain 958 1079 IPR036869 -
Tsu02g02778 1112 SMART dnaj_3 970 1048 IPR001623 -
Tsu02g02778 1112 MobiDBLite consensus disorder prediction 1093 1112 - -
Tsu02g02778 1112 Gene3D Tetratricopeptide repeat domain 542 813 IPR011990 GO:0005515
Tsu02g02778 1112 ProSitePatterns Nt-dnaJ domain signature. 1033 1052 IPR018253 -
Tsu02g02778 1112 CDD DnaJ 971 1045 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02778 Tsu-Chr2 29775562 29784030 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02778 K09527 - gmx:100800435 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02778 02 29775562 29784030 Tsu02g02778 02 29775562 29784030 ECH