Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02774 ATGAGTAGAAACGACTCCAAGTACTTTTCCACCACCAAAAAGGGTGAAATCCCTGAGCTCAAAGAAGAGCTTAATTCTCAGTACAAGGATAAGAGAAAAGATGCGGTGAAAAAAGTGATTGCTGCTATGACGGTTGGAAAGGATGTGTCGTCCTTGTTTACAGATGTGGTGAATTGTATGCAGACAGAAAATTTGGAGCTCAAAAAGTTAGTTTACTTGTATTTGATAAATTATGCAAAGAGCCAGCCTGACCTTGCTATACTCGCAGTAAATACATTTGTGAAGGATTCTCAAGATCCAAATCCTTTAATTCGTGCGTTAGCTGTGCGGACAATGGGATGCATTCGTGTTGATAAAATTACCGAGTATCTATGTGATCCACTTCAAAGATGTCTAAAGGACGATGATCCATATGTTCGCAAAACAGCAGCCATTTGTGTTGCAAAGCTCTATGACATAAATGCAGAGTTAGTCGAGGACAGGGGTTTTTTGGAATCACTGAAGGATTTGATATCTGATAATAATCCAATGGTTGTAGCTAATGCTGTTGCAGCACTCGCTGAAATTCAGGACAATAGCAGTAGACCCATCTTTGAGATCACTACTCATACACTGTCAAAGCTCCTCACTGCGTTAAATGAATGTACAGAATGGGGTCAAGTTTTTATACTGGATGCTCTTTCTAGATACAAGGCTGCTGATGCACGTGAGGCAGAAAACATCGTAGAAAGAGTTACCCCACGGTTACAGCATGCCAATTGTGCAGTTGTACTATCGGCTGTTAAGATGATCCTTCAACAAATGGAGCTCATCACCAGTACTGATGTGGTCCGGAATCTTTGCAAAAAGATGGCTCCTCCTCTTGTGACATTACTCTCGGCAGAACCTGAGATACAATATGTTGCCCTGCGAAATATCAATCTTATTGTACAAAGAAGACCAACAATTCTTGCACATGAAATTAAgGTGTTCTTCTGCAAATACAATGATCCTATATATGTGAAAATGGAGAAATTAGAAATCATGATAAAGCTTGCTTCAGACCGAAATATAGACCAGGTTTTATTGGAATTTAAGGAATATGCTACTGAAGTTGACGTAGATTTTGTTAGAAAGGCAGTTCGTGCAATTGGTCGTTGTGCCATCAAATTAGAGAGAGCAGCTGAAAGATGCATTAGTGTTTTGCTAGAGTTGATCAAGATAAAAGTAAATTATGTGGTTCAAGAGGCAATCATTGTTATCAAAGACATATTTAGACGATACCCTAACACATATGAGTCCATAATTGCAACTCTTTGTGAGAGCTTAGATACCTTGGATGAGCCCGAAGCCAAGGCATCAATGATCTGGATAATTGGTGAATATGCGGAAAGAATTGACAATGCTGACGAGCTTCTTGAAAGTTTCTTAGAAAGTTTCCCCGAAGAACCTGCACTAGTCCAACTGCAATTGCTGACGGCTACCGTCAAACTCTTCCTTAAGAAGCCAACTGAGGGCCCACAGCAGATGATACAGGTTGTTTTGAACAATGCCACCATGGAGACAGATAATCCTGATTTGCGAGATCGTGCATACATATATTGGCGTCTCCTCTCAACAGACCCCGAGGCAGCTAAGGATGTTGTGTTAGCTGAGAAGCCTGTGATAACCGATGACTCAAACAACCTTGATCCTTCTCTACTTGACGAACTTCTAGTCAATATTGCTACATTATCTTCTGTTTATCACAAGCCCCCAGAGGCATTTGTAACCCGCACACATTCATCAGCCCAGAAAACTGAAGATGACGAATATCCTGATGGAATCGAATCCGAGTCCTCTGTAAATCCTGCTAATGGTCCTGGGTCACCACCTACTTCCAGTTATACAATACCTGCTTCACCTCCACCAGCTGCTGCACCAGTGCCAGATTTACTTGGTGATTTGATAGGCATGGATAACAATTCTATTGTTCCTCTTGATCAGCCAGCTACTCCTTCCGGGCCTCCATTGCCTATTGTACTACCGGCTTCAACTGGCCAGGGTTTACAAGTCAGTGCACAGCTTACTAGGAGGGATGGTCAAGTATTCTACAGTATGTTGTTTGAGAACAATTCTCAAGTTCCACTTGATGGCTTCATGATTCAATTTAACAAGAACACATTTGGTCTTGCGGCTGCTGGCCCCCTGCAGGTTCCACAATTGCAACCTGGAACATCAACTAGGATACTCCTTCCTATGGTTATGTTCCAGAACATGTCCCAAGGTCCTCCTAGCTCAGTTTTGCAAGTTGCCTTAAAAAACAACCAACAGCCTGTGTGGTATTTCAACGATAAAATCTTATTCCATGTATTTTTTACCGAGGATGGTAGAATGGAACGTGCCACTTTCCTCGAGACATGGAGGTCCCTTCCGGATTCAAATGAAGTTTCCAAGGACTTCCCCGCTATCGTGATTGGTGGTGTGGATGCAACAGTGGAACGACTGGCTGCATCAAACATATTCTTTATTGCAAAGCGCAAGAATGCGAACCAGGATGTGTTTTACTTCTCAGCTAAACTGCCTCGAGGGATACCACTTTTAGTTGAGCTTACCACAGCGGTTGGAAACCCTGGCGTCAAATGTGCCATCAAGACACCAAGCCCTGAAATGTCCACATTTATCTTCGAAGCCATCGAGACTCTTCTTAGgagttaa 2676 0.4226 MSRNDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVANAVAALAEIQDNSSRPIFEITTHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPALVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATMETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNNLDPSLLDELLVNIATLSSVYHKPPEAFVTRTHSSAQKTEDDEYPDGIESESSVNPANGPGSPPTSSYTIPASPPPAAAPVPDLLGDLIGMDNNSIVPLDQPATPSGPPLPIVLPASTGQGLQVSAQLTRRDGQVFYSMLFENNSQVPLDGFMIQFNKNTFGLAAAGPLQVPQLQPGTSTRILLPMVMFQNMSQGPPSSVLQVALKNNQQPVWYFNDKILFHVFFTEDGRMERATFLETWRSLPDSNEVSKDFPAIVIGGVDATVERLAASNIFFIAKRKNANQDVFYFSAKLPRGIPLLVELTTAVGNPGVKCAIKTPSPEMSTFIFEAIETLLRS 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02774 891 MobiDBLite consensus disorder prediction 605 620 - -
Tsu02g02774 891 MobiDBLite consensus disorder prediction 582 639 - -
Tsu02g02774 891 Gene3D - 775 891 IPR012295 -
Tsu02g02774 891 PANTHER BETA-ADAPTIN-LIKE PROTEIN B 1 889 - -
Tsu02g02774 891 PIRSF Beta_adaptin 1 721 IPR016342 GO:0015031|GO:0030276
Tsu02g02774 891 MobiDBLite consensus disorder prediction 621 635 - -
Tsu02g02774 891 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 778 890 IPR009028 GO:0006886|GO:0016192|GO:0030117
Tsu02g02774 891 Gene3D - 661 773 IPR013037 GO:0006886|GO:0016192
Tsu02g02774 891 Pfam Adaptin N terminal region 15 533 IPR002553 GO:0006886|GO:0016192|GO:0030117
Tsu02g02774 891 SUPERFAMILY Clathrin adaptor appendage domain 662 776 IPR013041 -
Tsu02g02774 891 Pfam Adaptin C-terminal domain 666 769 IPR008152 GO:0006886|GO:0016192
Tsu02g02774 891 SMART alpha_adaptinc2 656 770 IPR008152 GO:0006886|GO:0016192
Tsu02g02774 891 SMART B2_adapt_app_C_2 779 890 IPR015151 GO:0006886|GO:0016192|GO:0030131
Tsu02g02774 891 SUPERFAMILY ARM repeat 8 581 IPR016024 -
Tsu02g02774 891 Pfam Beta2-adaptin appendage, C-terminal sub-domain 780 889 IPR015151 GO:0006886|GO:0016192|GO:0030131
Tsu02g02774 891 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 1 889 IPR026739 GO:0016192
Tsu02g02774 891 Gene3D - 3 592 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02774 Tsu-Chr2 29743779 29751907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02774 K12392 - gmx:100784577 1588.93