Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02764 ATGAATACGCTCATCCGATCCAGTCTCAGAACCAAGAAAGCTGAAGCTTTCGTATGTGCAGCGGTTCCCTTATGGTGTAGATCAAACAGTACAAAATCTTCTTTGCCAACAGATAATTCAATTTCTGATGCGAAAATTGGCCAAGGGTTCAAGGGCCATGCTATGCTTGCTCCTTTCACACCTGGGTGGCAGACTACTGATTTGAATCCTTTGATTATTGAAAAGTCCGAGGGAAGCTATGTATATGATATTAATGGGAAGAAATATCTTGACTCACTTGCTGGTCTATGGTGCACTNCTATGGGATTTACTTTGATAGCAAATGCattttattttgcagggggAAGTGAGCAGCGCCTTGTTGATGCTGCAAATGCACAATTGAAGAAGTTGCCATTTTACCATTCCTTCTGGAATCGAACCACAAAACCTACATTGGATCTAGCCAAGGAGCTGCTAGAATTTTTTACAGCCAGAAAAATGGCTAAAGCATTTTTTGTTAATAGTGGATCAGAAGCCAACGACACTCAGGTCAAAATTGTATGGTATTATTACAATGCACTTGGAAGaccaaataaaaagaaattcataGCTCGGACTAAATCGTATCATGGTTCAACAACCATAGCAGCCAGTCTTTCTGGTCTATCGCCTTTGCATCAAAAGTTTGATCTGCCAGCTCCCTTTGTTTTGCATACTGATTGTCCACACTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTGGCCAAGAatttggaggagctaattctGAAAGAGGGACCGGAGACGATTGCTGCATTTATTGCGGAACCAGTGATGGGGGCTGGAGGTGTCATACTTCCACCAGCAACTTATTTTGATAAGATCCAAGCCGTTGTCAAGAAGTATGATATCCTTTTTATTGCGGATGAGGTGATTTGTGCCTTTGGGAGGCTTGGGACAATGTTTGGTTCGGACAAATATAACATTAAGCCAGATCTTGTTTCCCTGGCAAAGGCACTCTCTTCTGGATACTTGCCAATTGGAGCTATCCTTGTGAGCCCAGAAATTGCAGAAGTAATACATTCACAAAGCAGCAAACTTGGTTCATTTTCTCACGGGTTCACTTATTCTGGATCACCTGTGCCCTGTgctgttgcacttgaagcactCAAAATATACAAGGAGAGAAATATTGTAGCCGTTGTGAACAAGATAGCTCCAAGGTTCCAAGATGGCCTAAAAGCTTTTTCTGACAGTCCCATCATTGGAgagATACGAGGAACAGGTTTGATCCTAGCGACTGAGTTCACTGACAACAAATCACCTAATGATCCATTTCCTCCTGAATGGGGAGTAGGTGCTTATTTCGGAGCACAATGTGAAAAGCGTGGGATGTTAGTTCGGGTAGCTGGAGATCTTATCATGATGTCTCCACCATTTATTATATCACCTGAAGAAGTTGACGAGttgatcagcatttatgagAAAGCTTTAAGAGAGACAGAAAAGAGAGTCCAAGAGCTCAAGTCTCAACCTAAATTAGCTTGA 1551 0.3978 MNTLIRSSLRTKKAEAFVCAAVPLWCRSNSTKSSLPTDNSISDAKIGQGFKGHAMLAPFTPGWQTTDLNPLIIEKSEGSYVYDINGKKYLDSLAGLWCTXMGFTLIANAFYFAGGSEQRLVDAANAQLKKLPFYHSFWNRTTKPTLDLAKELLEFFTARKMAKAFFVNSGSEANDTQVKIVWYYYNALGRPNKKKFIARTKSYHGSTTIAASLSGLSPLHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLAKNLEELILKEGPETIAAFIAEPVMGAGGVILPPATYFDKIQAVVKKYDILFIADEVICAFGRLGTMFGSDKYNIKPDLVSLAKALSSGYLPIGAILVSPEIAEVIHSQSSKLGSFSHGFTYSGSPVPCAVALEALKIYKERNIVAVVNKIAPRFQDGLKAFSDSPIIGEIRGTGLILATEFTDNKSPNDPFPPEWGVGAYFGAQCEKRGMLVRVAGDLIMMSPPFIISPEEVDELISIYEKALRETEKRVQELKSQPKLA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02764 516 CDD OAT_like 52 499 IPR005814 GO:0008483|GO:0030170
Tsu02g02764 516 Gene3D Aspartate Aminotransferase, domain 1 71 499 IPR015422 GO:0003824
Tsu02g02764 516 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 26 509 - -
Tsu02g02764 516 Pfam Aminotransferase class-III 70 499 IPR005814 GO:0008483|GO:0030170
Tsu02g02764 516 Coils Coil 492 512 - -
Tsu02g02764 516 Gene3D - 117 399 IPR015421 GO:0003824
Tsu02g02764 516 SUPERFAMILY PLP-dependent transferases 55 501 IPR015424 -
Tsu02g02764 516 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 26 509 - -
Tsu02g02764 516 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 307 344 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02764 Tsu-Chr2 29512883 29522236 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02764 K16871 - gmx:100792355 857.44