Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02739 ATGAAGCTTATGATCAACCAACCATCACAATTTCTTGCTTTGTTGAGTTTTTGCtcaatttttttccttgttGTTTCGGAAGACCCTTATAGATTCTTTGATTGGAACATTACTTATGGTGATATTTATCCACTTGGAGTTAAACAACGGGGGATTCTTATCAATGGTCAATTTCCAGGACCTGAAATTTACTCTGTAACCAATGATAATTTGATCATCAATGTACACAATAGCTTGCCTGAGCCATTTCTTCTATCTTGGAATGGTGTTCAACAAAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACCACATGTCCTATTCCTCCTGGCAAGAATTTCACATACACACTTCAAGTTAAAGATCAAATTGGAAGCTTCTTCTATTTTCCATCTCTTGCTTTCCACAAAGCAGCTGGTGGTTTTGGATCCATCAAAATCCTTAGTAGGCCAAGAATTCCTGTTCCTTTCCCTGACCCTGCTGATGATTACACATTTCTAATTGGTGATTGGTACAATATTGATAACACGAAGCTGAGTAAAGTTCTAGATTTTGGACACAGACTTCCATTCCCACAAGCAGTTCTTATCAATGGTCGTGCACAGGGTACAGCATTCACAGTTGAACAAGGGAAAACATATAGACTTAGAATATCAAATGTTGGACTACAAAACACACTCAACTTTAGGATTCAAGACCATATAATGAAATTGGTTGAAGTTGAGGGAACTCACACTGTACAAACATCTTATTCATCAATAGATGTTCATGTTGGACAATCTTATTCTGTCCTTATCACAGCTGATCAAGCACCTAAGGACTATTACATTGTTGCTTCTACTCGTTTCACTGATAGGACCCTCACAAGTACTGCAGCATTTCACTACAGTAACTCACAACAACCTCTTTCTGGCCCTATTCCTGGTGGACCAACCACTCAGATTGATTGGTCCATCCAACAAGCTCGATCAATCAGGACAAATCTTACAGCAAGTGGACCAAGGCCAAATCCACAAGGTTCATATCACTATGGCATGATAAACATTAGTAGAACAATCACATTACAGAGTTCAGCAGCACAAGTGAATGGAAAGCAAAGATATGCAGTCAACAGTGTATCATTCATACCAGCTGACACTCCTCTGAAGTTAGCTGATTACTTCAAGATTGACGGTGTTTTCCAAGTCGGAAGCATCCCAGATAGCCCTTCCGGTAAACCAATGTATCTTGATACTTCAGTCATGGGTGCTGATTTTCGAGCCTTTGTTGAGATCGTGTttcaaaatcatgaaaatatCGTCCAAAGTTGGCACATTGACGGTTACTCATTTTGGGTTGTCGGGATGGATGGTGGTGCGTGGACGCCTAATAGTCGTAATCAATACAACCTCAGAGATGCCGTGTCTAGGAGCACAACACAGGTATATCCTAAGTCATGGACTGCAATTTATATGGCACTAGACAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGTCACGACAATATCTTGGACAACAATTCTATCTAAGAGTATATTCAGATGCTGGATCCATTAGAGATGAATACCCAATTCCTAAGAATGCCCTTCTTTGTGGCAAAGCTGTGGGCAGAGAAACAAGACCATTATGA 1635 0.3939 MKLMINQPSQFLALLSFCSIFFLVVSEDPYRFFDWNITYGDIYPLGVKQRGILINGQFPGPEIYSVTNDNLIINVHNSLPEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGSIKILSRPRIPVPFPDPADDYTFLIGDWYNIDNTKLSKVLDFGHRLPFPQAVLINGRAQGTAFTVEQGKTYRLRISNVGLQNTLNFRIQDHIMKLVEVEGTHTVQTSYSSIDVHVGQSYSVLITADQAPKDYYIVASTRFTDRTLTSTAAFHYSNSQQPLSGPIPGGPTTQIDWSIQQARSIRTNLTASGPRPNPQGSYHYGMINISRTITLQSSAAQVNGKQRYAVNSVSFIPADTPLKLADYFKIDGVFQVGSIPDSPSGKPMYLDTSVMGADFRAFVEIVFQNHENIVQSWHIDGYSFWVVGMDGGAWTPNSRNQYNLRDAVSRSTTQVYPKSWTAIYMALDNVGMWNVRSEFWSRQYLGQQFYLRVYSDAGSIRDEYPIPKNALLCGKAVGRETRPL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02739 544 Gene3D - 30 151 IPR008972 -
Tsu02g02739 544 Pfam Multicopper oxidase 163 298 IPR001117 -
Tsu02g02739 544 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 17 537 - -
Tsu02g02739 544 Gene3D - 161 334 IPR008972 -
Tsu02g02739 544 CDD CuRO_3_AAO_like_1 377 498 IPR034275 GO:0005507
Tsu02g02739 544 SUPERFAMILY Cupredoxins 24 176 IPR008972 -
Tsu02g02739 544 Gene3D - 345 540 IPR008972 -
Tsu02g02739 544 PANTHER MULTI-COPPER OXIDASE 17 537 IPR045087 -
Tsu02g02739 544 SUPERFAMILY Cupredoxins 157 336 IPR008972 -
Tsu02g02739 544 CDD CuRO_1_AAO_like_1 32 147 IPR034273 GO:0005507
Tsu02g02739 544 Pfam Multicopper oxidase 380 516 IPR011706 GO:0005507|GO:0016491
Tsu02g02739 544 SUPERFAMILY Cupredoxins 346 535 IPR008972 -
Tsu02g02739 544 Pfam Multicopper oxidase 37 150 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02739 Tsu-Chr2 29049060 29055074 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02739 - - gmx:100818914 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02739 02 29049060 29055074 Tsu02g02739 02 29049060 29055074 ECH