Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02738 atggGAAGTGTTTCATCGGAAGAAGAAGTTTCTGAACGTTGTGGAAGTTATAGTCCGAGTGCTGACATCAGCGAATCGGAGAGTTGTAGTAGTTTTTGTGGTCGTCGTTTTGATGCCGAAGGAGCTTCCAGTTCCGCTAATCTCTCGCCACGTCAGCTCGCCGCTCATTTTAACCTACCCACGGTGGCGCAGGTCATGCTTCCGGTTATCGGTGGTAAAGATGTTGCGGTTTGGGATCACAAACGTGATCTGGATTTGTCCGAAGTTGAAATGATGAAGGAACGTTTCGCTAAGCTGCTTTTAGGAGAAGACATGTCTGGTGGTGGAAAGGGGGTTTGCACTGCGCTTGCAATCTCTAACGCAATCACGAATCTCTCCGCAACTGTGTTTGGAGAGTTATGGAGGTTAGAGCCACTAGCACCACAGAAAAAAGCAATGTGGCGAAGAGAAATGGACTGGCTACTGTGTGTGAGTGATTCAATTGTTGAGTTGGTGCCTTCTGTGCAGCAGTTTCCAGGTGGTGGAACCTATGAAGTGATGGCAACACGGCCTCGTTCTGATTTGTACATCAACCTTCCTGCTTTGAAGAAGCTTGATGGAATGCTGCTAAGTATGCTGGATGGATTTTGTGATACACAGTTTTGGTATGTTGACAGAGGCATTATGTTGGGTGATTCTAAGGATTGTGATGAGTATGATAGACCTTCTGTTAGGCAAGAAGAGAAATGGTGGCTTCCTTCTCCCAAGCTTCCGCCAAATGGGTTGTGTGAGGATGATAGGAAAAGGTTGCAGCAGTGTAGGGATTGCACTAACCAGATACTAAAGGCTGCCATGGCAATTAATAGTTCTGTTCTTGCTGAAATGGAAATTCCTGCCGCCTATGTAGAATCCTTGCCCAGGAATGGTAAAGCTTGTTTAGGGGATATAATATATCGGTACATAACTGCTGCCCAGTTCTCGTCTGAATGTCTCCTAGATTGCCTGGATCTATCATCTGAGCACCACACGCAGGATATAGCTAATAGAATTGAGGCTGCTATACATGTATGGAGATTGAAAGACCATAAGAAAGTTAAAAATTCGGTGAAAGCCCGAAGGTCTTGGGGTGGAAAAGTAAAAAGCCTTGTTGCTGACGGTGATAAGAACCATTTTCTTACTCAACGGGCAGAGACACTACTGCAAAACTTGAAACATCGATTTCCTGGGCTCCCTCAAACAGCACTAGATATGGCCAAGATACAATATAATAAgGATGTAGGGCAGTCTATTCTTGAAAGTTATTCCAGGGTAATGGAGAGCTTGGCCTTTAACATAATGGCCAGGATAGATGATGTCCTTTATGTAGACGATAGTATTAAACGATGTGCAGCTGCAGATTCTATCTTGTTTGGTAGGGGAGGCTTTGGTGGTATGCCTATTCAGAAGCGAATGTCTCCCAGCCCCTTCTCAATTCAACACACCCCATATGCCTCTCCTTTTGGAACCCCATCCTCCTCTCCTGCTAGCGGGAGCTCTTGCAGTCCATGTAGAACACAAGCTGTCAAGAAGAATGCCAAGGGAAAAGATTCAAAGACCGGAAAGTTTTCCCCAGCTGATTTTGAGAAGGTATGGTCATACACAGGAAACCTCAATGTAAGAAGAGTTTCTGGCGAGGCTCCGGAAAGAAACTGA 1671 0.4518 MGSVSSEEEVSERCGSYSPSADISESESCSSFCGRRFDAEGASSSANLSPRQLAAHFNLPTVAQVMLPVIGGKDVAVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMDWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSMLDGFCDTQFWYVDRGIMLGDSKDCDEYDRPSVRQEEKWWLPSPKLPPNGLCEDDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYVESLPRNGKACLGDIIYRYITAAQFSSECLLDCLDLSSEHHTQDIANRIEAAIHVWRLKDHKKVKNSVKARRSWGGKVKSLVADGDKNHFLTQRAETLLQNLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSILFGRGGFGGMPIQKRMSPSPFSIQHTPYASPFGTPSSSPASGSSCSPCRTQAVKKNAKGKDSKTGKFSPADFEKVWSYTGNLNVRRVSGEAPERN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02738 556 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 556 IPR038937 GO:0005085
Tsu02g02738 556 MobiDBLite consensus disorder prediction 1 25 - -
Tsu02g02738 556 MobiDBLite consensus disorder prediction 515 529 - -
Tsu02g02738 556 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 556 - -
Tsu02g02738 556 ProSiteProfiles PRONE domain profile. 79 459 IPR005512 GO:0005085
Tsu02g02738 556 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 87 453 IPR005512 GO:0005085
Tsu02g02738 556 MobiDBLite consensus disorder prediction 474 529 - -
Tsu02g02738 556 Gene3D PRONE domain, subdomain 1 79 318 - -
Tsu02g02738 556 MobiDBLite consensus disorder prediction 478 512 - -
Tsu02g02738 556 Gene3D PRONE domain, subdomain 1 319 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02738 Tsu-Chr2 29029511 29033344 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02738 - - gmx:100789706 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02738 02 29029511 29033344 Tsu02g02738 02 29029511 29033344 ECH