Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02737 ATGGACGAGAAGAGTGGTTCAGGTTGTTCGAAGAGGAAAAGTGGTGGTTCCAACGCGGTTCATGAAGTTCTAGATGGTTCTAATATTATGGAGTTAGTTGGAAACAAACATGTATTCAACAATTTTGTGAACCATAAGTTTCACGAGTTGGATAAAGATAGAGATGGTAAACTCTCTGTAAAAGAACTTCAACCTGCTGTTGCTGATATTGGTGCTGCTCTTGGTTTACCTTCTAAAGGCACTAATCCTGATTCTGATCACATCTATTCTGAGGTGTTGAATGAATTCACACATGGAAAGCAAGAAAAAGTGAGCAAGACTGAGTTCAAAGAAGTTCTCTCAGACATTCTATTGGGCATGGCAGCTGGACTCAAACGAGACCCGATTGTTATACTTCGCATTGATGGCGAAGATCTTCTCGAGTTTCTTAATGGTTCAACTTATGAACCAGAAATTGTATCCATATTCTCTCAAATTGAATCGCCGCAGAAATCACTTCATGACTATATAATTCAAGCTCTCAGCAAACTCAATGTTGACCAAGGGATTCCACCTACATCTGATTCTTGGGTTATTAGCAACATTGTGGAACCAGCACTGGTTTCTGAACATGTGTATGATTTGGATAAACCTGTTTCTCAAGAAATATTTTTGGAGGAATTCAAGAAAGTGGCATTGCGTGTCGCTAATCGTCTTAAGGAGCAACCGGTAATAGTTGCTCATAGTGAAAGTACCTTTGATGGAAGTGGTGTTAAGAGACTATTATCAAACAAATTTGAATTAGACAAGATATTGAACTCAGCTATAGAGACTTTACCTAAAGATCGAAATGGAAAAATGTCAAAGGATTACCTACGAGTGGCGCTGGACGTGGTGGCTCCATCTGCTGCTTTACCTCCATTTGGAGCAATCGAAGAGATGGATAAGGTTATTGGTGAAGTGTTTAAGATGGTGAGTGCAGATGATGCAAAGTTGGTGAAAGAAGATGAATTCAAGAAAATATTAACTGAAATATTAGGAAGTATTATGTTGCAGTTGGAAGGAAATCCCATATCAGTTTCTTCAAATTCTGTAGTGCATGAGCCTCTAGGCTCATCTTCTACACTTCTGCAACCAACTCCTGCTGAAACAGCATAA 1137 0.3914 MDEKSGSGCSKRKSGGSNAVHEVLDGSNIMELVGNKHVFNNFVNHKFHELDKDRDGKLSVKELQPAVADIGAALGLPSKGTNPDSDHIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFLNGSTYEPEIVSIFSQIESPQKSLHDYIIQALSKLNVDQGIPPTSDSWVISNIVEPALVSEHVYDLDKPVSQEIFLEEFKKVALRVANRLKEQPVIVAHSESTFDGSGVKRLLSNKFELDKILNSAIETLPKDRNGKMSKDYLRVALDVVAPSAALPPFGAIEEMDKVIGEVFKMVSADDAKLVKEDEFKKILTEILGSIMLQLEGNPISVSSNSVVHEPLGSSSTLLQPTPAETA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02737 378 SUPERFAMILY EF-hand 46 349 IPR011992 -
Tsu02g02737 378 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 5 377 - -
Tsu02g02737 378 Gene3D - 36 341 - -
Tsu02g02737 378 Pfam EF-hand domain pair 45 112 IPR002048 GO:0005509
Tsu02g02737 378 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
Tsu02g02737 378 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 5 377 - -
Tsu02g02737 378 SMART efh_1 310 338 IPR002048 GO:0005509
Tsu02g02737 378 SMART efh_1 264 292 IPR002048 GO:0005509
Tsu02g02737 378 SMART efh_1 42 70 IPR002048 GO:0005509
Tsu02g02737 378 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02737 Tsu-Chr2 28995560 29000267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02737 13 377 EF-hand Containing Proteins AT4G38810 67.120 2.21e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02737 - - gmx:100820516 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02737 02 28995560 29000267 Tsu02g02737 02 28995560 29000267 ECH