Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02733 ATGGGAGATGAGGGTATAGTGAGAGGTGTCACAAAGCAGGCAACCCCCGGAAAGGCTACTATATTAGCTCTTGGCAAGGCTTTCCCTCACCAGCTTGTGATGCAAGAGTATTTAGTTGATGGATATTTTAGGGACACTAATTGTGACAATCCTGAGCTTAAGCAGAAACTTGCTAGACTTTGCAAGACAACAACAGTAAAAACAAGGTATGTTGTTATGAATGAGGAGATACTAAAGAAGTATCCCGAACTTACCGTTGAAGGCGCCTCGACTGTAAAACAACGTTTAGAGATATGTAACAAGGCAGTAACACAAATGGCAATTGATGCTTCCAAAGTTTGCCTAAAGAATTGGGGTAGACCCTTATCAGACATAACTCATGTGGTTTATGTTTCATCTAGTGAAGCTAGATTACCCGGCGGTGACCTATATTTATCAAAAGGACTAGGACTAAACCCTAAAATTCAAAGAACAATGCTCTATTTCGCTGGATGCTCGGGAGGCGTAGCTGGCCTTCGCGTTGCGAAAGACATAGCTGAGAACAACCCTGGAAGTAGAGTTTTGCTTGCTACTTCTGAAACTACAATTATTGGATTCAAGCCACCAAGTGTTGATAGACCTTATGATCTTGTTGGTGTGGCACTCTTTGGAGATGGTGCTGGTGCCATGATAATTGGCTCAGACCCGGTATTTGAATTTGAGACACCATTGTTTGAGCTTCATACCTCAGCTCAGGAGTTTATACCAGACACAGAGAAGAAAATTGATGGGAGGCTGACAGAGGAGGGCATAAGTTTCACACTAGCGAGGGAGCTTCCGCAGATAATCGAAGACAATGTTGAGGGATTCTGTGATAAACTAATTGATGTTGTCGGATTGGAGAATAAGGAGTACAATAAGTTGTTTTGGGCTGTGCATCCAGGTGGGCCTGCAATATTGAATCGCGTGGAGAAGCGACTTGAGTTGTCGCCAGAGAAGCTGAATGCAAGTAGAAAAGCTCTAATGGATTATGGAAATGCTAGCAGCAATACTATTGTTTATGTGCTAGAGTATATGCTAGAAGAGGGCAAGAAGATTAGAAAAGCAGGTGGAGGAGATTCTGAATGGGGATTGATACTTGCTTTTGGACCTGGAATTACTTTCGAGGGGATTTTAGCAAGGAACCTATGTGCATGA 1176 0.4286 MGDEGIVRGVTKQATPGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDNPELKQKLARLCKTTTVKTRYVVMNEEILKKYPELTVEGASTVKQRLEICNKAVTQMAIDASKVCLKNWGRPLSDITHVVYVSSSEARLPGGDLYLSKGLGLNPKIQRTMLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPVFEFETPLFELHTSAQEFIPDTEKKIDGRLTEEGISFTLARELPQIIEDNVEGFCDKLIDVVGLENKEYNKLFWAVHPGGPAILNRVEKRLELSPEKLNASRKALMDYGNASSNTIVYVLEYMLEEGKKIRKAGGGDSEWGLILAFGPGITFEGILARNLCA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02733 391 Gene3D - 4 236 IPR016039 GO:0016746
Tsu02g02733 391 CDD CHS_like 19 385 - -
Tsu02g02733 391 SUPERFAMILY Thiolase-like 216 387 IPR016039 GO:0016746
Tsu02g02733 391 PIRSF PKS_III 7 390 IPR011141 GO:0009058|GO:0016747
Tsu02g02733 391 Pfam Chalcone and stilbene synthases, N-terminal domain 11 229 IPR001099 -
Tsu02g02733 391 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 389 - -
Tsu02g02733 391 Pfam Chalcone and stilbene synthases, C-terminal domain 239 389 IPR012328 -
Tsu02g02733 391 Gene3D - 237 388 IPR016039 GO:0016746
Tsu02g02733 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 389 IPR011141 GO:0009058|GO:0016747
Tsu02g02733 391 SUPERFAMILY Thiolase-like 13 232 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02733 Tsu-Chr2 28946165 28948868 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02733 87 376 Miscellaneous Gene Families AT4G34250 24.299 1.52e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02733 - - vun:114168705 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02733 02 28946165 28948868 Tsu02g02733 02 28946165 28948868 ECH