Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02729 ATGAGACCTCAGAGGACATCGATCCACGCCATCTCCACATGGGTCAGGCGACAACCACCAAAGGTCAAGGCTTTTCTTGCCGTTGTTTCCGGTATGGCTGCTCTCGTTCTCCTTCGATTCATCGTTCACGATCACGATAATCTTTTTGTCGCTGCCGAAGCTGTTCACTCTCTCGGTATCACCGTTCTTATCTATAAACTCATGAAAGAAAAGACCTGTGCTGGATTATCACTCAAATCCCAGGAATTGACAGCTATATTTTTAGCTGTTAGGCTGTATTGTAGTTTTGTCATGGAATATGACATACACACCATACTTGATTTGGCTACTTTCGTTACTACGTTGTGGGTTATATACATGATTCGTTTTAAATTGAAGGCTAGTTACATGGAGGAGAAGGATAACTTTGCAATATACTATGTGGTGATACCATGTGCCGTGTTAGCCTTGCTCATTCATCCATCAACTTCTCATCATATATTGAACAGGATTTTCTGGGCCTTCTGTGTATATCTGGAAGCTGTTTCAGTACTACCCCAACTTCGGGTCATGCAGAACACTAAGattGTTGAGCCATTCACCGCACATTACGTATTTGCACTCGGTGTAGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTTCAGGTGTTAGACACCCGTGGACATTTATTGGTTGCCTTGGGGTATGGTTTATGGCCGTCAATGGTTCTTATCTCAGAAATTGTCCAGACATTCATCTTAGCAGATTTCTGTTACTATTATGTGAAAAGTGTTTTCGGCGGACAGCTTGTTCTACGCCTTCCCTCTGGAGTGGTGTGA 819 0.4322 MRPQRTSIHAISTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGITVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATFVTTLWVIYMIRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02729 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu02g02729 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu02g02729 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu02g02729 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu02g02729 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu02g02729 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu02g02729 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 271 - -
Tsu02g02729 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02729 Tsu-Chr2 28925832 28929088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02729 5 272 Miscellaneous Gene Families AT2G21190 89.552 0.0 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02729 - - gmx:100803652 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02729 02 28925832 28929088 Tsu02g02729 02 28925832 28929088 ECH