Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02712 ATGGCACCACCACCGGCGATCCAATCGCCGAATCCAGAAGAAATCCAACAATTCCTAAGCTCCGTTCTCTCACAACGTGGTCCATCAGCAGTACCATATTCCGAAGACACAAAATGGCTTATCCGTCAACACCTTCTTACTCTCATCACAGCTTTTCCTTCTCTTGAACCCAAAACCGCCACTTTCACTCACAACGATGGTCGCACCGTTAATCTCCTTCAAGCCGACGGAACTATTCCGATGACATACCAATCTGTCACTTACAACATCCCCGTTGTTATTTGGCTCATGGAATCTTACCCTCGTCATCCACCTTGTGTTTATGTTAACCCTACCAGAGACATGATTATCAAACGCCCTCATCCTCATGTTAATCCTTCTGGTTTAGTTTCTGTTCCTTATTTGCATAATTGGATTTACCCTAGTTCTACTTTGGTTGATCTTGTTCTTAATTTGAGTCTTATCTTTGGTCGTGATCCTCCTCTTTATTCCCAACGTAGACCTAGTAGTAATACTAATAACCCTAATCCTAATCAAAACCCTAATGTTAATcctcatcataatcataatcatcatcctAATCCAAATATCAATCAAAGTTCTAATTTTGCAGCTGTTTCTTCATCTGGGTATTCTCATCCTGCTAGGAACAATAATAATTACCCTCCTTCGCCTTATTCACCTGCGCCTGTGCGGCCTGCTCAAACTGAGGATCCAACTGAGGTTTTCAAAAGGAATGCTATTAACAAGCTAGTAGAGATGGTGCATAATGATGTTACGAATTTGAGGAAGACGAGGGAAGCTGAGATGGAGGGTTTGTTTAGTTTGCAAGGGGTTTTGAAGCAGCGTGAGGATGTTTTGAATAAGGGTgtgaaggaaatgcaagaggAGATGGAGGGTTTGGAACAGCAGCTTCAGATGGTTTTGATGAATACTGATGTTTTGGAGGGTTGGTTGAGGGATAATCAAGGGAAGAAGATGAGTTTGGAGAATGTTGAGGATGCTTTTGAGTGTGTGGATGTGCTTTCTAAACAGATGCTTGAGTGTACTGCTGCTGATTTGGCTATTGAAGATACACTTTATGCGTTGGATAAAGGTGTTCAGGTTGGGGCTGTACCGTTCGATCAGTACATGAGGAGTGTGAGGGTGTTGTCGAGGGAGCAGTTCTTTCACCGAGCTACAGCTGCTAAAGTTAGAGCTGCTCAGTTGCAGGCGCAGGTTGCTAATATGGCTGCTAGGAATCATCATTATGGTAGCTGA 1260 0.4167 MAPPPAIQSPNPEEIQQFLSSVLSQRGPSAVPYSEDTKWLIRQHLLTLITAFPSLEPKTATFTHNDGRTVNLLQADGTIPMTYQSVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLHNWIYPSSTLVDLVLNLSLIFGRDPPLYSQRRPSSNTNNPNPNQNPNVNPHHNHNHHPNPNINQSSNFAAVSSSGYSHPARNNNNYPPSPYSPAPVRPAQTEDPTEVFKRNAINKLVEMVHNDVTNLRKTREAEMEGLFSLQGVLKQREDVLNKGVKEMQEEMEGLEQQLQMVLMNTDVLEGWLRDNQGKKMSLENVEDAFECVDVLSKQMLECTAADLAIEDTLYALDKGVQVGAVPFDQYMRSVRVLSREQFFHRATAAKVRAAQLQAQVANMAARNHHYGS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02712 419 Pfam UEV domain 42 162 IPR008883 GO:0015031|GO:0036211
Tsu02g02712 419 MobiDBLite consensus disorder prediction 161 239 - -
Tsu02g02712 419 SUPERFAMILY UBC-like 25 162 IPR016135 -
Tsu02g02712 419 SUPERFAMILY Endosomal sorting complex assembly domain 340 400 IPR037202 -
Tsu02g02712 419 ProSiteProfiles Steadiness box (SB) domain profile. 340 408 IPR017916 -
Tsu02g02712 419 MobiDBLite consensus disorder prediction 164 220 - -
Tsu02g02712 419 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 10 414 - -
Tsu02g02712 419 Gene3D Ubiquitin Conjugating Enzyme 7 163 IPR016135 -
Tsu02g02712 419 Coils Coil 284 311 - -
Tsu02g02712 419 Gene3D - 341 401 - -
Tsu02g02712 419 ProSiteProfiles UEV domain profile. 22 166 IPR008883 GO:0015031|GO:0036211
Tsu02g02712 419 Pfam Vps23 core domain 335 397 IPR017916 -
Tsu02g02712 419 PANTHER PROTEIN ELC 10 414 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02712 K12183 - gmx:100778834 598.201