Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02700 ATGGCAGGAACAGCAACAGGTTGTTACAAATGTGGAAGACCAGGTCACTGGTCACGCGACTGTCCTTTCTCCGCTCCCAATTCCAATCCCAATCCAAACCCTAATTCCACCAAAACCCCCCACGATCTTCCTCCACCTCCTCCTTCCTCTTCCTTCAAGCCTTCTGGCCCTAGATCCGCCGTCGAAAAGCCCAAGAAGCTCCCCCGCACCCGTCCCAAACTCACTCCCGAGCTTCTTCTTTCCGACGACGGTCTCGGCTACGTTCTTCGCTATTTCCCTCGCAACTTCAAATACCACGGTCGTGGCCATGAGGTTCGTGATTTGGGTAACTTGCTTGATTTGTACTCTCAATGGCACTCTCGTTTGCTACCTTATTACTCCTTTAATCAATTTGTTCACAAAGTTGAGAAAGTTGCTGCTACTAGGCGTGTTAAGACTAGCCTTAGAGAATTGAGAGAAAGAGTTGCAAATGGTGGGGATCCATCAAAATTGCGTGAACCACCAGTTGTGCACGACATCCCAGATGGTGAACAAGAAAATGGAGAAGCAAGTCATCAAGTGAATGAGGTGTTTGCAGAACCCGGAAATGTTAATGACATTCAAGAAGACATGTTGAATGATATATTTGACAAAGCTACCGAAGAACCTTCTCAGCCCATGCAAAATGTGATTAGTGCGAGTACCGATCCCAAAAGTAGCGCAGTTGAAACTACATCAAATGAAGTCCCAAATAGTGGAGCCAGTCTGTCCAGCAATGCTGAGATAACAGCAGAGCAGAGAGCCCGTATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGCGCAGCTCTAGCCAGCATATCACAGTCTTCCTAG 855 0.476 MAGTATGCYKCGRPGHWSRDCPFSAPNSNPNPNPNSTKTPHDLPPPPPSSSFKPSGPRSAVEKPKKLPRTRPKLTPELLLSDDGLGYVLRYFPRNFKYHGRGHEVRDLGNLLDLYSQWHSRLLPYYSFNQFVHKVEKVAATRRVKTSLRELRERVANGGDPSKLREPPVVHDIPDGEQENGEASHQVNEVFAEPGNVNDIQEDMLNDIFDKATEEPSQPMQNVISASTDPKSSAVETTSNEVPNSGASLSSNAEITAEQRARMEANRLKALERRAALASISQSS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02700 284 MobiDBLite consensus disorder prediction 215 257 - -
Tsu02g02700 284 MobiDBLite consensus disorder prediction 214 260 - -
Tsu02g02700 284 ProSiteProfiles Zinc finger CCHC-type profile. 8 22 IPR001878 GO:0003676|GO:0008270
Tsu02g02700 284 Pfam Zinc knuckle 7 22 IPR001878 GO:0003676|GO:0008270
Tsu02g02700 284 PANTHER TIMELESS-INTERACTING PROTEIN 4 276 - -
Tsu02g02700 284 MobiDBLite consensus disorder prediction 20 75 - -
Tsu02g02700 284 MobiDBLite consensus disorder prediction 37 53 - -
Tsu02g02700 284 MobiDBLite consensus disorder prediction 22 36 - -
Tsu02g02700 284 SMART c2hcfinal6 7 23 IPR001878 GO:0003676|GO:0008270
Tsu02g02700 284 Gene3D - 4 72 - -
Tsu02g02700 284 Pfam Replication Fork Protection Component Swi3 73 154 IPR012923 GO:0005634|GO:0006974|GO:0048478
Tsu02g02700 284 SUPERFAMILY Retrovirus zinc finger-like domains 6 24 IPR036875 GO:0003676|GO:0008270
Tsu02g02700 284 PANTHER TIMELESS INTERACTING-RELATED 4 276 IPR040038 GO:0000076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02700 K10904 - gmx:100799216 386.726