Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02681 aTGAAGAACATAAACATATCTTTGTGCATGGTTATGTCTCTAGTACTTGTTCACTTAGGTGGAAGTGTACCTTCAAGTTTCAACTATGGTGATGCTCTTGACAAGAGTTTGATGTTCTTTGAAGCACAAAGGTCTGGTAAATTACCACTTCAACAACAGCGGATTAAATGGCGCGGTGATTCTGGTCTCAAGGATGGAATTCAGCAAGGAGTGGACCTAGTGGGAGGATACTATGATGCAGGTGATCATGTGAAGTTTGGGCTACCAATGGCATTCAGTGTGACAATGCTTGCATGGGGGGCAATTGAGTTTAATAAGGAAATGGCAGACTTAAACCAAATAGGACATACACTATGGGCCATCAAATGGGGAACTGATTACTTCATCAAAGCACATCCTCAGCCTAATGTTCTTTGGGGACAGGTGGGTGATGGAGCTTCTGATCATTACTGCTGGGAACGTGCCGAAGACATGAAAACTTCAAGAACTGCCTATAAAATTGATGAACAACACCCTGGTTCTGATCTTGCAGGTGAAACTGCAGCTGCATTGGCTTCTGCAGCCATTGCTTTCAGGCCTTACAACTCTTCTTACTCTAATCTCCTGCTAGTTCACGCAAAACAGCTCTTCACATTCGCGGATAGGTACAGAGGTCTATATGATGAATCTATATCGTGTGCTCACCAATTCTATGCTTCTTCTGGTTATTCAGACGAATTGTTATGGGCTGCTGCCTGGCTGCATCGCGCAACCGGTGATGAATACTACCTAAAGTATGTTGTGGACAATGCGGTATATATGGGTGGAACCGGCTGGGCGGTGAAAGAGTTCTCTTGGGACAACAAATACGCTGGTGTCCAGACGCTCCTATCAAAGGTATTACTAGAAGGTAAAGCAGGTCCATATGCATCTACACTAAAGCAATATCAGGCCAAAGCAGATTATTTTTCCTGCGCCTGTTTGCAAAAGAACGATGGTTACAATGTTCAGAAAACTCAAGGTGGCTTAATATACGTGCACGAATGGAACAACATGCAGTATGCTTCATCTGCTGCATTTCTTTTAGCTGTTTACTCTAATTACCTGTCAGCTGCAAAAGCACAGCTCAACTGTCCTGAGGGTCAAATTCAGCCTCAAGAACTCCTCAATTTTGTCAAGTCACAGGCTGATTATATCCTTGGTAAAAACCCGGAGGATATGAGTTACTTGGTTGGATATGGACCAAAATATCCTATTCATGTTCACCACAGAGGCGCTTCCATTGCATCAATCTTTTCTCTTCATTCTGAGGTTGGTTGCGCACAAGGATTTGACGCGTGGTATAACCGTATTGAGCCAAATCCTAATGTCATCTATGGAGGTCTTGTCGGGGGTCCAGATAGAAATGATGACTACTCCGATGACAGATCCAATTATGAACAAACTGAGCCTACACTCTCAGGTTCTGCTCCTCTTGTAGGCATCTTCGCTAAACTGCAAAGTTCATATGGGAATCCAGGTGCAACAAGCTTTTACAAAGAGCCAACACCTAAAACACTTTGGAAAGAACCAACACCTAAAACACAAGGTGCACCAGTTGAATTCCTTCACTCAATTTCCAGCTCATGGACTGTTGGTACTACAACTTATTACCGACACAAGGTGATAATCAAGAACACTTCTGCAAAGCCAATCTCAGATCTTAAGTTGTTGATTGAGAATCTATCAGGCTCTGTATGGGGTCTATCTCCAACTGGAGAGAAGAGCACCTATGAACTTCCACAGTGGCTCAAGGTCTTGAATCCTGGTTCTGAATGTATGTTTGTTTATGTTCAAGGTGGACCTCAAGCAAAAATCTTGATTCAAAGCTTCCACTAA 1857 0.4313 MKNINISLCMVMSLVLVHLGGSVPSSFNYGDALDKSLMFFEAQRSGKLPLQQQRIKWRGDSGLKDGIQQGVDLVGGYYDAGDHVKFGLPMAFSVTMLAWGAIEFNKEMADLNQIGHTLWAIKWGTDYFIKAHPQPNVLWGQVGDGASDHYCWERAEDMKTSRTAYKIDEQHPGSDLAGETAAALASAAIAFRPYNSSYSNLLLVHAKQLFTFADRYRGLYDESISCAHQFYASSGYSDELLWAAAWLHRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQTLLSKVLLEGKAGPYASTLKQYQAKADYFSCACLQKNDGYNVQKTQGGLIYVHEWNNMQYASSAAFLLAVYSNYLSAAKAQLNCPEGQIQPQELLNFVKSQADYILGKNPEDMSYLVGYGPKYPIHVHHRGASIASIFSLHSEVGCAQGFDAWYNRIEPNPNVIYGGLVGGPDRNDDYSDDRSNYEQTEPTLSGSAPLVGIFAKLQSSYGNPGATSFYKEPTPKTLWKEPTPKTQGAPVEFLHSISSSWTVGTTTYYRHKVIIKNTSAKPISDLKLLIENLSGSVWGLSPTGEKSTYELPQWLKVLNPGSECMFVYVQGGPQAKILIQSFH 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02681 618 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Tsu02g02681 618 Pfam Carbohydrate binding domain CBM49 527 605 IPR019028 GO:0030246
Tsu02g02681 618 SMART CBM49_2 526 606 IPR019028 GO:0030246
Tsu02g02681 618 MobiDBLite consensus disorder prediction 456 477 - -
Tsu02g02681 618 PANTHER ENDO-1,4-BETA-GLUCANASE 9 573 - -
Tsu02g02681 618 Gene3D - 24 506 IPR012341 GO:0005975
Tsu02g02681 618 Pfam Glycosyl hydrolase family 9 29 488 IPR001701 GO:0004553|GO:0005975
Tsu02g02681 618 PANTHER ENDOGLUCANASE 5 9 573 - -
Tsu02g02681 618 SUPERFAMILY Six-hairpin glycosidases 26 501 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02681 Tsu-Chr2 28340619 28344146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02681 27 618 Glycoside Hydrolase AT1G48930 70.297 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02681 K01179 - gmx:100802420 1041.57