Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02680 atGGCAACAACGTCGTTTTCTAGCTTGCAAATTGCAATGTCAAGGTCATGCATTCCTTCATCTCAAAAGTTTGCCGATGTGAGCACTGTGGTTCTTGGTAGCAAGTCCAAGGCGGGATCATGGAGTAAACTTGCAAGTGCATGTCATGTTGCATCGGTGCAGCCCTTCCAAAGGAGCTTTACATCATCATCCGCAAAATCTGTCAAAATTGTGACGAAGGCAACGTCCGAGTCTAATGAAACAAGTCCAATTTCAGGATTGCCAATTAATTTGAAAGGTAAAAGGGCTTTTATTGCTGGTGTGGCCGATGACAATGGATACGGATGGGCAATTGCAAAATCTCTTGCTGCAGCAGGAGCTGAAATTCTTCTCGGCACATGGGTTCCTGCTCTGAATATTTTTGAGTCCAGCTTACGACGTGGGAAATTTGACGAATCACGCGTattACCTGATGGTTCGTTAATGGAAATCACCAAAGTTTATCCCTTGGATGCTGTTTTTGACAATTATGAGGATGTACCAGAAGATataaaaacaaacaagcGCTATGCTGGATCCAGCAAATGGACAGTTAAGGAAGTTGCTGAATCTGTTAAGGAAGATTTTGGCAGCATAGACATCCTCGTGCACTCACTTGCCAATGGACCAGAGGTGACCAAACCACTGTTGGAGACATCTCGGAATGGATATCTTGCTGCGTTATCTGCATCTAGTTACTCCTATGTTTCTTTACTCAAGCATTTTCTTCCAATCTTGAACCCAGGTGGTTCTTCACTCTCTCTCACATACATCGCTTCAGAGAGGATCATTCCTGGATATGGTGGTGGAATGAGTTCTGCAAAAGCTGCACTCGAAAGTGATACACGAGTGCTTGCTTTTGAAGCTGGTAGAAAGCGCAAAATTAGAGTCAACACTATATCCGCTGGTCCACTAAGAAGTCGTGCTGCAAAAGCAATTGGATTCATTGAAAAGATGATTGATTATTCAATAGCCAATGCACCTCTACAGAAAGAGCTATCAGCAGAGGAGGTTGGCAATGCAGCGGCTTTCTTGTCATCACCTTTAGCATCGGCTATCACGGGTACTGTTCTATATGTTGACAATGGTTTGAATGCTATGGGCGTTGGAGTTGACAGTCCCATATTTAAAGATCTCGACCTTCCGAAGGAGCAACATTAA 1179 0.4317 MATTSFSSLQIAMSRSCIPSSQKFADVSTVVLGSKSKAGSWSKLASACHVASVQPFQRSFTSSSAKSVKIVTKATSESNETSPISGLPINLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILLGTWVPALNIFESSLRRGKFDESRVLPDGSLMEITKVYPLDAVFDNYEDVPEDIKTNKRYAGSSKWTVKEVAESVKEDFGSIDILVHSLANGPEVTKPLLETSRNGYLAALSASSYSYVSLLKHFLPILNPGGSSLSLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKRKIRVNTISAGPLRSRAAKAIGFIEKMIDYSIANAPLQKELSAEEVGNAAAFLSSPLASAITGTVLYVDNGLNAMGVGVDSPIFKDLDLPKEQH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02680 392 Gene3D - 94 320 - -
Tsu02g02680 392 Gene3D Enoyl acyl carrier protein reductase 321 378 - -
Tsu02g02680 392 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 1 391 IPR014358 GO:0004318|GO:0006633
Tsu02g02680 392 CDD ENR_SDR 93 374 IPR014358 GO:0004318|GO:0006633
Tsu02g02680 392 Pfam Enoyl-(Acyl carrier protein) reductase 190 371 - -
Tsu02g02680 392 PANTHER ENOYL-ACYL-CARRIER REDUCTASE 1 391 - -
Tsu02g02680 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 374 IPR036291 -
Tsu02g02680 392 PRINTS Glucose/ribitol dehydrogenase family signature 334 354 IPR002347 -
Tsu02g02680 392 PRINTS Glucose/ribitol dehydrogenase family signature 299 316 IPR002347 -
Tsu02g02680 392 PRINTS Glucose/ribitol dehydrogenase family signature 277 296 IPR002347 -
Tsu02g02680 392 PRINTS Glucose/ribitol dehydrogenase family signature 203 214 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02680 Tsu-Chr2 28334760 28340224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02680 1 386 Acyl Lipid Metabolism Gene Families AT2G05990 72.868 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02680 K00208 - gmx:100785606 686.026