Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu02g02664 | ATGGCTCAACCACCTCTTTCTGCTCAAACGCCTCCTTCTATGCCTAATTCTTCTTCAACTCCTGCATCATCACCGGCGCCACCTATCTCTTACGCCGTTAATCAAAATCTCAACGCTTCTGGGAATTCTCACCACCCGCCGTCACATTCTGGAATGAAGCCGAATTCGGCTCCTATTCAACCTCCACTTCATAATCTTCCTCCACGTGCTGCTGCTTCTCCTtcattttcatataattttccTCAAAGTGCGTCACCTTTTGCTGACAACCAACATGCACAATCTAACACTAACATGTCGGATTCCGTTACACAAGATTTTAGTAAAGTGTCATCTGCATCAGGCAACCTACATCCTGCTCCTGCTCCTACTTCTATATCCTCAATGCCGCCACCCTCTGACCCTAACTATCGCCCAACTACTTCATGGATGCCAACTGCCCCAACTTTTCCTGTCCATCCTGTAATGCCTGGAACTCCTGGTCCCCCTGGATTAGCAAAACCTGTGTATCCAGCTGCTCAATCTGCAAGCACAGATTTTTCCTCAGGTGCAGTACTGAGACAAAATATGCCAACTGTACCCATTGCATCTGATCCTAATGCCTCACATAGAGGCTTACCCTATCCACCCATACCTTCCATGGTTGCTCCACCTCAGGGATATTGGTTACAGCCTCCGCAGATGAGTGGTGCACTTAGGCCACCTTTTAATCAATACCCTGCTTCTTTTCCTGGCCCCTTTCCATTTCCAGCACGTGGTGTTGCTCTCCCTGCTGTTCCAGTACCTGATTCTCAGCCTCCTGGTGTTACTCCTGTGGGTGCTGCCAGCATTTCTGCACCTTCTGCTCCCGGTCATCTACTGAGAGGAACATCTGGTGTGCAGATGGAAGTAATTTCAGCACATACTGATGACAAGCACAAATCAAACACCATTGTGACACAGAATGAGGATGTTGCTAATGATCAACTAGATGCTTGGACTGCTCACAAGACTGAATCAGGGATTGTATACTATTATAATGCTTTGACGGGGAAATCCACATACGATAAACCTCTTGGCTTTAAAGCGGAGGCACACCAAGTTTCTGTGCAGCCTACTCCAGTTTCAATGGTAGATTTGCCTGGTACTGATTGGCAGTTGGTCTCTACCAGTGatggaaaaaaatattactataacAACCGAACCAAGACAAGCTGCTGGCAAATTCCAAATGAGGTggctgatttgaaaaaaaagcaGGATGGTGATGTTACAAAAGATCATTTAATCCCAGTTCCAAATACTAATGTATTGTCGGATAAAGGATCTGGAATGGTTACTCTGAATGCTCCCGCTATTACTACCGGTGGTCGTGATGCTGCAGCCCCTAAGCCCTCTATAGTACAGAGTTCACCATCGGCACTGGATTTGATCAAGAAGAAGTTGCAGGAATCAGGAGCACCTGTTACACCCTCTTCTATTGCTACACCATCAGTGCTACCAGGAtctgaattaaatggttcaaaAGCAACCGATTCTACAGCTAAGAGCCTGCAGAATGATAATAGCAAAGATAAACCAAAAGAGCCTAATGGTGATGCTAATCTCACTGATACATCTTCAGATTCAGAAGATGAGGATAGTGGGCCTTCAAAGGAGGAGTGCATAAATCAATTTAAGGAGATGCTTAAGGAACGAGGTGTGGCACCATTCTCAAAGTGGGAGAAAGAACTACCAAAGCTAGTATTCGATCCCCGTTTTAAGGCTATCCCTAGTTATTCTGCTAGGAGAACCTTGTTTGAACATTATGTTAAAAATCGTGCGGAAGAAGAACGCAAAGAAAAACGTGCTGCACAAAAGGCTGCAATTGAGGGGTTTAAGCAGTTATTGGATGAAGCCTCAGAGgATATTAATGACCACACTGATTATCACACTTTTCGAAAGACATGGGGAAACGATCCACGGTTTGAGGCATTGGACCGCAAGGAACGGGAGCACCTTCTGAACGAAAGGTGCCACTTTGCATTTAATTGGACCATTATAAACTTTCTAACTTCATTTTCTTTGCATGTGATGTGTTCACATAATCATTATTCATACCATTAG | 2085 | 0.436 | MAQPPLSAQTPPSMPNSSSTPASSPAPPISYAVNQNLNASGNSHHPPSHSGMKPNSAPIQPPLHNLPPRAAASPSFSYNFPQSASPFADNQHAQSNTNMSDSVTQDFSKVSSASGNLHPAPAPTSISSMPPPSDPNYRPTTSWMPTAPTFPVHPVMPGTPGPPGLAKPVYPAAQSASTDFSSGAVLRQNMPTVPIASDPNASHRGLPYPPIPSMVAPPQGYWLQPPQMSGALRPPFNQYPASFPGPFPFPARGVALPAVPVPDSQPPGVTPVGAASISAPSAPGHLLRGTSGVQMEVISAHTDDKHKSNTIVTQNEDVANDQLDAWTAHKTESGIVYYYNALTGKSTYDKPLGFKAEAHQVSVQPTPVSMVDLPGTDWQLVSTSDGKKYYYNNRTKTSCWQIPNEVADLKKKQDGDVTKDHLIPVPNTNVLSDKGSGMVTLNAPAITTGGRDAAAPKPSIVQSSPSALDLIKKKLQESGAPVTPSSIATPSVLPGSELNGSKATDSTAKSLQNDNSKDKPKEPNGDANLTDTSSDSEDEDSGPSKEECINQFKEMLKERGVAPFSKWEKELPKLVFDPRFKAIPSYSARRTLFEHYVKNRAEEERKEKRAAQKAAIEGFKQLLDEASEDINDHTDYHTFRKTWGNDPRFEALDRKEREHLLNERCHFAFNWTIINFLTSFSLHVMCSHNHYSYH | 694 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu02g02664 | 694 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 378 | 405 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | MobiDBLite | consensus disorder prediction | 75 | 123 | - | - | |
| Tsu02g02664 | 694 | ProSitePatterns | WW/rsp5/WWP domain signature. | 378 | 403 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | Gene3D | FF domain | 603 | 669 | IPR036517 | - | |
| Tsu02g02664 | 694 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 320 | 353 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | CDD | WW | 326 | 351 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | ProSiteProfiles | FF domain profile. | 545 | 599 | IPR002713 | - | |
| Tsu02g02664 | 694 | SMART | FF_2 | 612 | 667 | IPR002713 | - | |
| Tsu02g02664 | 694 | SMART | FF_2 | 545 | 599 | IPR002713 | - | |
| Tsu02g02664 | 694 | SUPERFAMILY | WW domain | 325 | 355 | IPR036020 | GO:0005515 | |
| Tsu02g02664 | 694 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR 1 | 81 | 665 | IPR045148 | GO:0003712|GO:0070063 | |
| Tsu02g02664 | 694 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR HOMOLOG | 81 | 665 | - | - | |
| Tsu02g02664 | 694 | SUPERFAMILY | WW domain | 377 | 409 | IPR036020 | GO:0005515 | |
| Tsu02g02664 | 694 | MobiDBLite | consensus disorder prediction | 12 | 55 | - | - | |
| Tsu02g02664 | 694 | CDD | WW | 376 | 405 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | MobiDBLite | consensus disorder prediction | 124 | 138 | - | - | |
| Tsu02g02664 | 694 | MobiDBLite | consensus disorder prediction | 478 | 546 | - | - | |
| Tsu02g02664 | 694 | Pfam | WW domain | 325 | 351 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | Pfam | FF domain | 615 | 663 | IPR002713 | - | |
| Tsu02g02664 | 694 | Pfam | FF domain | 549 | 596 | IPR002713 | - | |
| Tsu02g02664 | 694 | MobiDBLite | consensus disorder prediction | 479 | 511 | - | - | |
| Tsu02g02664 | 694 | ProSiteProfiles | FF domain profile. | 612 | 667 | IPR002713 | - | |
| Tsu02g02664 | 694 | SMART | ww_5 | 373 | 405 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | SMART | ww_5 | 321 | 353 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | MobiDBLite | consensus disorder prediction | 1 | 142 | - | - | |
| Tsu02g02664 | 694 | Gene3D | FF domain | 531 | 602 | IPR036517 | - | |
| Tsu02g02664 | 694 | SUPERFAMILY | FF domain | 540 | 605 | IPR036517 | - | |
| Tsu02g02664 | 694 | SUPERFAMILY | FF domain | 604 | 666 | IPR036517 | - | |
| Tsu02g02664 | 694 | ProSitePatterns | WW/rsp5/WWP domain signature. | 326 | 351 | IPR001202 | GO:0005515 | |
| Tsu02g02664 | 694 | Gene3D | - | 303 | 364 | - | - | |
| Tsu02g02664 | 694 | Gene3D | - | 365 | 419 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu02g02664 | K12824 | - | gmx:100816454 | 914.45 |