Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02657 ATGATTCTTCAACAAGCTTCTCCCACTTTTCACTTCTCTCTTTGTCCTTGCAATAACAACAATGATTCTTCTCTCCTTCCTTTTCCCCTTTCCAAAACCATGAAAAAACACTTCATTTCAAATTATTACTCATATCGAAAATTCCGAAGAAAAAAATGGACCCTTTACTCTTCTTCAATTCACAAACAACAACGTGATGATTCTAATTGGAACCACCAATTTTCCAATTCCAATACAAGGGGGGCAAAAAGTTTTGTTCTTGATAATAATAACAGTAACActattgatgatgaagaacttCAAAGTGGTGAATTGCGAGATTCGAAAGTTCAATTGGGTTCAAATTTCACTACTTTTCAAGAGGATCCAATTGTGGATAAGCTTAGAACTCAATTGGGTGTAATTCACCCAATTCCATCGCCACCAATTAACCGAAACGTTGCtggtttgtttgtgttttttttctttgttggtgttgtttttgataaattatgGACTTTtaggagaagaagaaacaaagttaGTAGTGAAGATAGTTTTCGTGGCGTGTGGCCACAAGTGCCTActagttttagtttatttttggaaaagGATTTGCAAAGGAAAGAGTCAGTTGAATGGGTGAACATGGTGTTAGGAAAGTTGTGGAAGGTTTATAGAGGTGGACTTGAGAATTGGGTTATTGGGTTACTTCAACCTGTTATTGATGATTTAAAGAAGCCTGATTATGTTGAAAGAGTTGAGATTAAGCAATTTTCATTAGGGGATGAACCTTTGTCTGTTAGGAATGTTGAACGTAGGACTTCTCGACGTGTCAATGATTTACAGTACCAAATAGGCCTTAGGTATACTGGAGGTGCTCGCATGCTGTTAAGTCTTTCTCTGAAATTTGGCATTATTCCAATTGTTGTACCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTGCGGCTAATACCAACAGCACCTTGGGTTGGAGCTGCTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAGCTGTCTCCATTTCGTTTGTTCAATTTAATGGCAATACCAGTTCTCTCGATGTTTTTGACCAAACTTCTTACAGTAGATTTACCTAGACTATTTGTACGGCCAAACAAAATCGTTTTGGATTTCCAAAAGGGAAAAGCTGTTGGTCCCGTTACAGTTGGCCCTGTTGCTGAGGATGTTAAATCTGGAGAAATGCCAGAAGGAAACATGGATTCTGTTGGTGAATTATCAGTCACTCTTGTGGATGCTCGAAAGCTTCCTtacatttttgGCAAGACAGATCCTTATGTTGTTCTTAGCCTTGGAGATCAAACCATACGTAGCAAAAAGAACAGTCAAACTACTGTTATTGGGGCCCCTGGAATGCCAATTTGGAATCAGGATTTCCATATGCTTGTTTCCAACCCTAAAAAGCAGAAGTTAAGTATCCAAGTAAAAGACGCGCTGGGATTTGCAGATTTGCCTATTGGTAAAGGAGAGGTTGATTTGGGATCTCTTCAAGACACTGTACCAACAGACAGAATTGTGGTTTTACAAGGGGGTTGGGGGTTTTTAAGAAAGGGCTCATCTGGGGAGATATTGCTTAGGCTAACGTATAAAGCATATGTGGAAGATGAGGAAGATGACAAGACTGAGGAGGATTCCATTGATATAGATGTTTCAGACGATGAGTTGTCTGATACAGAAGAAGCAAATGACACTGATAATGGTGTAAGAGATTCTGCGGACCAAACAGATAAAGAGTCATTTATGGATGTTTTGGCTGCAATAATTGTTAGCGAAGAATTTCAAGGGATAGTAGCATCTGAAGCAGGGTATACCAAAGGTTTGGATAATGGCTCAAATACAGGATCTAAAGTATCAAAATCTCCTGTTGCCAACATGGAATCAATTCCTTCTAGTTCTGATACTTCTCAAGGTTCTGGAGGGTCAGCATTAATTTGGCTTGCTGTGATTACTAGCATAGCAGTACTAATTGCTGTCAATATCAGTGGTTCAAGTATCTTCAATCCGTAA 2052 0.3694 MILQQASPTFHFSLCPCNNNNDSSLLPFPLSKTMKKHFISNYYSYRKFRRKKWTLYSSSIHKQQRDDSNWNHQFSNSNTRGAKSFVLDNNNSNTIDDEELQSGELRDSKVQLGSNFTTFQEDPIVDKLRTQLGVIHPIPSPPINRNVAGLFVFFFFVGVVFDKLWTFRRRRNKVSSEDSFRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWVIGLLQPVIDDLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLSLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTAPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPRLFVRPNKIVLDFQKGKAVGPVTVGPVAEDVKSGEMPEGNMDSVGELSVTLVDARKLPYIFGKTDPYVVLSLGDQTIRSKKNSQTTVIGAPGMPIWNQDFHMLVSNPKKQKLSIQVKDALGFADLPIGKGEVDLGSLQDTVPTDRIVVLQGGWGFLRKGSSGEILLRLTYKAYVEDEEDDKTEEDSIDIDVSDDELSDTEEANDTDNGVRDSADQTDKESFMDVLAAIIVSEEFQGIVASEAGYTKGLDNGSNTGSKVSKSPVANMESIPSSSDTSQGSGGSALIWLAVITSIAVLIAVNISGSSIFNP 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02657 683 MobiDBLite consensus disorder prediction 622 652 - -
Tsu02g02657 683 Pfam C2 domain 419 514 IPR000008 -
Tsu02g02657 683 SMART C2_3c 420 520 IPR000008 -
Tsu02g02657 683 ProSiteProfiles C2 domain profile. 400 521 IPR000008 -
Tsu02g02657 683 MobiDBLite consensus disorder prediction 551 590 - -
Tsu02g02657 683 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 419 546 IPR035892 -
Tsu02g02657 683 MobiDBLite consensus disorder prediction 551 576 - -
Tsu02g02657 683 Gene3D C2 domain 405 547 IPR035892 -
Tsu02g02657 683 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 201 388 IPR031468 GO:0008289
Tsu02g02657 683 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 17 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02657 Tsu-Chr2 27844676 27850685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02657 419 555 Acyl Lipid Metabolism Gene Families AT4G13550 30.714 3.65e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02657 - - gmx:100817508 966.066