Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02637 ATGACAAAGCCTTGTGATTTGCAAATCAACATCAATGGTCAACAGATATTTCTTTTGAAAGAGAAGATTATATCAAAATACTGTGGAAAGGTGAAGAAAATCTTGAATCATCAAAAGAGAAGATGTCAAGTGAAGAAGATGGGAATTATGATCAGCGATTTCCCTGGAGGTTCAGACGGGTTTGAGCTAGTTTCAAGGTTTTGTTACAACAATGGCAAAATACCAATTACTGTGGCAAATGTGTCTCTTCTCTTTTGTTGTGCCATTTATCTTGGAATGACTGAGGAAGTTTTCAACAACAATCTCTTGCAACAAACACAAACTTTTATTGAGGGGATGCATAATTGGAAATGGAATGACATACTTGAAAGTCTAATGAGTTGCAAATTGTTCTATACATATGCAGATTGCTATGGTCTATTGGAAAAGATCATTAGTGCATTGTTAACAAAGATTGTCCAAAATTCAGATGCAAACCTCATAACTTACACTGCCtctttctcatcatcatcaccatcatcatcatcaacaccatCTTCACCTGAAAGCAATTCTGCCAAGAGATTCTCGTCTTCAACACAAACTACACCAGAAATAACCAAGTCAACTATGCCAAGCAAAGCATGGTGGTTTGAAGATTTGGCAACATTACCACCAAAGATAATAGAGAAACTTTTTCAGTGTATTGAAGCATACAAAGCTGAAAACAACAACTTAATCTTTACAAGATTTCTGTTGCAATATCTGAAAACAGCTACTCAAACCATATCTGTTGATTGCAGAAACAGCAGTGAGTATGCTGCTCTTGCAGAAACAGCTGCTTATGGAGTCATACTTGTTGGTAAGAAAACCTTTTCTTGCAGAGGGCTATTTTGGGTATTAAGGATTGTTTCTAGATTAGGGTTGAGTAAAGGTTGCAGAACTGAACTGGAGAAATTGATTGGAGGGATGCTTGAACAAGCTACACTGGATGATCTTTTGGTCTCTGGAAATGATATGGGGATTTATTATGATGTTAACTTGGTGATAAGATTGGCTAAACAATTTGTTGATACCAATAGCTATGATGGAGTGTCTTTACAGAGAATGAAAAGGGTTGGTAGATTAATTGACAAGTATTTGAGAGAGATATCACCTGATCAGAAACTCAAGATCTCTAAATTTCTTGGAGTTGCAGAATGTTTACCTGACTCTGCAAGGGATTGCTTTGATGGGATGTACAAAGCCATTGATATCTATCTTGAGTCTCATCCAAATGTTCCATTTGAGGAAAGATCAAGATTGTGCAAGTGTCTTAACTATGGTAAACTCAGTTTTGGAGCTAGTAAAGATCTGGCCAAGAACCCCAGAATACCTCCAGAGATTGCAATGCAGGCACTTATTTcccaacaaagaaaaattccAACAAGCAACTTTGTAACTGAGAGTCCAAGAAAAAGCCGTTCCCAAATAGTTTTGTACAATGAAGCCAGCAAAAACAGCTTCTCCCAAGAGAGAAAGTACATAAAACTAAACCTGGAGGGATTGCAATATAAGGCAGTAGAACTGGAGAAATTAGAAGAAGTGAATGATCAGATTTCAAATATGTTTAGCCAAAATGTCTTGCTCACTCCTCGAGCTAGAACCTTGCCAAGATATTGTTGA 1644 0.3577 MTKPCDLQININGQQIFLLKEKIISKYCGKVKKILNHQKRRCQVKKMGIMISDFPGGSDGFELVSRFCYNNGKIPITVANVSLLFCCAIYLGMTEEVFNNNLLQQTQTFIEGMHNWKWNDILESLMSCKLFYTYADCYGLLEKIISALLTKIVQNSDANLITYTASFSSSSPSSSSTPSSPESNSAKRFSSSTQTTPEITKSTMPSKAWWFEDLATLPPKIIEKLFQCIEAYKAENNNLIFTRFLLQYLKTATQTISVDCRNSSEYAALAETAAYGVILVGKKTFSCRGLFWVLRIVSRLGLSKGCRTELEKLIGGMLEQATLDDLLVSGNDMGIYYDVNLVIRLAKQFVDTNSYDGVSLQRMKRVGRLIDKYLREISPDQKLKISKFLGVAECLPDSARDCFDGMYKAIDIYLESHPNVPFEERSRLCKCLNYGKLSFGASKDLAKNPRIPPEIAMQALISQQRKIPTSNFVTESPRKSRSQIVLYNEASKNSFSQERKYIKLNLEGLQYKAVELEKLEEVNDQISNMFSQNVLLTPRARTLPRYC 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02637 547 MobiDBLite consensus disorder prediction 166 201 - -
Tsu02g02637 547 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 523 - -
Tsu02g02637 547 ProSiteProfiles NPH3 domain profile. 208 466 IPR027356 -
Tsu02g02637 547 Pfam NPH3 family 209 441 IPR027356 -
Tsu02g02637 547 PANTHER OS12G0117600 PROTEIN 2 523 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02637 Tsu-Chr2 27568055 27570181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02637 6 470 EF-hand Containing Proteins AT3G44820 27.075 7.25e-51 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02637 - - gmx:100808259 803.897