Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02629 ATGATTGACTCAAATCCACCACTCTTGAATCATTATGGAGCACTTTTGAGAAATTCAGCTGAACCTCAAAAGGCTAAAAGTTTAACTGATAAAGATAATAATACTGTGGTGGATGCTTGTGAACTACCATTGATAGACCTTAATGGTCTTAAAAGTTGTAATGTAAGAGAAAGATTGGCTTGCACTGCATCAATATGCAAGGCAGCATCAGAATGGGGATTTTTTCAAGTGATAAACCATGGTATAAACCCTGAACTACTAAGAAATATGAGGGAGGAGCAAATGAAGTTGTTTAGGGTACCCTTTGAGAAGAAGGCCACTTGCGGACTTCTAAACAATCCATATAGGTGGGGGACACCAACAGCTACTCGATCAAATCAGTTTTCATGGTCAGAAGCTTTCCACATTCCTCTCACCATGATTTCAGAAGAAGCTTGTTGGGGTGAATTCAGTACTTTAAGAGAAGCAATAAATGAGTTTACACCAGCTATGCTAGAAGTGTCTAGGCTACTGGCAGGTATTCTAGCAGAAAACATGGGCCACCCAACAGATGCAGTTGAAAAACTCTGTGATGCAAGCACATGCTTTCTGAGATTGAATCACTATCCTTCCTGCCCAAAATctaaagaagaaatttttggATTAGTACCTCACACTGACAGTGATTTCCTCACAATCCTTTATCAAGATCAAGTTGGTGGACTCCAACTCATGAAAGATTCCAAATGGGTCGCTGTAAAACCAAATCCAGAGGCTCTTATTGTTAACATTGGAGACCTTTTCCAGGCCTGGAGTAATGATGAGTACAAAAGTGTGGAGCACAAGGTAGTGGCAAATGACAAAGTGGAAAGATACTCCATTGCTTACTTCCTATGTCCTTCTTACACTACCATGATAAGTGGCTGCAAGGAACCTTCTACATATAGGAAGTTCACCTTCGGAGAATATCGACAGCAAAATCAAGAAGATGTCAAGAAAATAGGACACAAGATAGGACTGTCAAAATTTCTACATAAAGACACATACACAACGGCCACCGTTTAG 1044 0.3956 MIDSNPPLLNHYGALLRNSAEPQKAKSLTDKDNNTVVDACELPLIDLNGLKSCNVRERLACTASICKAASEWGFFQVINHGINPELLRNMREEQMKLFRVPFEKKATCGLLNNPYRWGTPTATRSNQFSWSEAFHIPLTMISEEACWGEFSTLREAINEFTPAMLEVSRLLAGILAENMGHPTDAVEKLCDASTCFLRLNHYPSCPKSKEEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPEALIVNIGDLFQAWSNDEYKSVEHKVVANDKVERYSIAYFLCPSYTTMISGCKEPSTYRKFTFGEYRQQNQEDVKKIGHKIGLSKFLHKDTYTTATV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02629 347 Pfam 2OG-Fe(II) oxygenase superfamily 196 293 IPR044861 -
Tsu02g02629 347 Gene3D - 15 326 IPR027443 -
Tsu02g02629 347 SUPERFAMILY Clavaminate synthase-like 36 321 - -
Tsu02g02629 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 293 IPR005123 -
Tsu02g02629 347 PANTHER OS02G0630300 PROTEIN 23 330 - -
Tsu02g02629 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 136 IPR026992 -
Tsu02g02629 347 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02629 Tsu-Chr2 27427948 27430771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02629 22 318 Glycosyltransferase AT5G59530 29.560 2.33e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02629 - - gmx:100809329 590.112