Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02615 ATGGCGGATAGCgtggtttcttttcttttggaaCACTTATCTCAATTGCTGCAACGCGAAGCTAATTTGCTTTGTGGCGTGGAAGACAAAATCATATCCCTCCGCAATGAACTCGAAATCATAAATGTCTACCTCAAAACTTCCCATCAAGggaagaacaacaacaaacagATTGAACAGAAGGTTCTGAGTCAGATCAGAGATGTCTCCTACGTAGCTGAGGATGTAATCGACACATTCATTGCCAATGTCTCCATCTACAAGAAAAGAAACGTCATAGGAAGAATGATTCACAGCGTTGGTCATGCAAAGTTACTCCACGACGTAGCAGAGAAAATTGACAAGATCAAAACAACACTCAACGAGATACACGAAAACAAGGTCAAATACAATCAAGAAAGTACTGATCAATCAGCATCAGCAAGAGAAGAGGAGGAGAGAACACGATCACTGCACAAATTAAGAAGAAATGTGGAGGAGGAAGATGTTGTAGGCTTTGTCCATGAATCTGAGGCAGTCATCAATAGACTCATAGAGGGTGGTTCGCCTCGTCTCAACGTTGTTTCAATCATTGGTATGGGTGGACTGGGCAAAACAGCTCTTGCTCGAAAGGTCTATAACAATGAAAAGGTGAAGAACCACTTCAATTGCCGTGCATGGATTTACGTTTCAAATGAGTGTAGAGTCCGAGAACTCTTACTTGGTATTCTTCAAAATTTGATGTCAAACCATGCTTATGAATTTAGAAAGAGCAAGGACAAAAAGAAGAGTAAGAAACACAATGAAGCTGTGAATAATTCTCAAGACATCTCTAACTTAAGTGATGATGAACTTAAGAAAAGAGTGTGGGAAATCTTGAAGTGGAAAAGGTATTTGCTGGTTCTTGATGACTTATGGAAAATACAAGATTGGGATGAGGTAAAAGATGCTTTTCCCGATGGAAAGATAGGAAGCAAAATACTGATAACTAGCCGTTTGACAGAAGTTGCTTCGCATACCGGACGAGATCCTCCTTACTTCCTTCAATTTCTCAATGAAGAACAAAGTTGGGAGCTCTTCTCCAAAAAAGTGTTTAGAGGAGAAGAGTACCATTCTGATGTTGGATCTTTAGGTAAGCAATTCGTTAAAAGTTGCGGCGGGTTGCCACTTTCAATAGTGGTACTGGCAGGACTTTTAGCAAACAAAGAAAAGTCACACAGAGAATGGTCCAAAGTGTTAGGACATGTCAATTGGTATCTTACCCGAGACGAGACCCAAGTTAAGGATGTAGTACTTAAACTCAGTTTCGACAACTTGCCCTCAAAATTAAAACCATGTTTTCTATATCTAGGGATATTCCCTGAAGATTCTGAAATATGTGTAAGGCAATTGTTGCACCTATGGGTCGCTGAAGGATTTATACAAGAAACAGGAAGTAGGGATCCAAATGATGTTGCTGAAGACTACTTGTACGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACGAGTGAAGGATAGTGGAGTCGTGAAAACATGTCGCATCCACGATCTTCTCAGAGATCTCTGCATATTGGAGAGCAAAGAGGACAAGATCTTCCAAGTTTGTACGAATAACAACATTTCGTTCCCCACAAACCCTCGCAGATTGTCTGTCCATTCTAGCACATATCACTATGCTTCTTCAAGCACCAATGACCATTCATGTGTTCGTTCTTTGTTTTGCTCTGACCCGGACTGCTTCGTTTATAGTAACGAGTGGAAATGGCTTTGCAAAGGCTTCAAATTGCTTCGAGTGTTGGATCTTGAGGgaaagtatttttttaagatttctTCAAACTTGGGAAACTTTGTCCACTTGAGGTACTTAAGAATAAACTCACAATATATTAGAAGTGTTCCAGATTCTATTTGCAACCTTCAAAATCTACAAACATTAGACTTTGGATCTTCAACCATGCTCACCACAATTTCTTTCCCCTATGGAATAACAAAGCTCAAGCATCTAAGACATTTATATACTTCTGGGCCTATCATACTACGTGGTCGTCGTTCAGATGGTGAAGTTATGTGGAATCTTCAAACCATATCTTCCATTGTCCTCAATAAAGATACAACATATCTCATAGAGAAAGAAAGTTTCCCTAAACTAAGAAAATTAAGATTGTATATCTCCTCAAACTTCAAGGGAGATCCCGAGGAAGTGTTGCAAATTCTGAAGCACTTGAGATATCTAAGTATACTAAAAATTGATAATGCCCTCAACCTTTTAACTTGTGCAGTCATGTTTCCTCCCAACATTACCAAGTTAACATTGTCATGTATTAGTTGCTTGAATGATGACGGGATGAAAGGTATTGGAAGTCTCACCAAACTCCAAATTTTGATCTTAACCGGAGACAATTGGTTTTCAAGCGAATTTCCTTCAGattcatttttttatcttaattgtGTTGAGGACGGGTTCCCAGAGTTGCAGGAGTTTCGAATGGAACATCTGCCCATCCAAAACTGGAAATTAGTCAATGGTTCGATGCCACGCCTTCAAATCCTTGTTATTCACAACTGTTATAAGTTGGATAGCCTCCCAAGTGAACTGTGGTCTTTGACTACCTTAAGAAAAGTTTGTGTTCAGAAACCCTCCAATGCAATGGCTGCAATGGTACAAAAGTTGGAAGTTAATAATGGATGTGAGGTCATT 2679 0.3867 MADSVVSFLLEHLSQLLQREANLLCGVEDKIISLRNELEIINVYLKTSHQGKNNNKQIEQKVLSQIRDVSYVAEDVIDTFIANVSIYKKRNVIGRMIHSVGHAKLLHDVAEKIDKIKTTLNEIHENKVKYNQESTDQSASAREEEERTRSLHKLRRNVEEEDVVGFVHESEAVINRLIEGGSPRLNVVSIIGMGGLGKTALARKVYNNEKVKNHFNCRAWIYVSNECRVRELLLGILQNLMSNHAYEFRKSKDKKKSKKHNEAVNNSQDISNLSDDELKKRVWEILKWKRYLLVLDDLWKIQDWDEVKDAFPDGKIGSKILITSRLTEVASHTGRDPPYFLQFLNEEQSWELFSKKVFRGEEYHSDVGSLGKQFVKSCGGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTRDETQVKDVVLKLSFDNLPSKLKPCFLYLGIFPEDSEICVRQLLHLWVAEGFIQETGSRDPNDVAEDYLYELIDRSLIQVARVKDSGVVKTCRIHDLLRDLCILESKEDKIFQVCTNNNISFPTNPRRLSVHSSTYHYASSSTNDHSCVRSLFCSDPDCFVYSNEWKWLCKGFKLLRVLDLEGKYFFKISSNLGNFVHLRYLRINSQYIRSVPDSICNLQNLQTLDFGSSTMLTTISFPYGITKLKHLRHLYTSGPIILRGRRSDGEVMWNLQTISSIVLNKDTTYLIEKESFPKLRKLRLYISSNFKGDPEEVLQILKHLRYLSILKIDNALNLLTCAVMFPPNITKLTLSCISCLNDDGMKGIGSLTKLQILILTGDNWFSSEFPSDSFFYLNCVEDGFPELQEFRMEHLPIQNWKLVNGSMPRLQILVIHNCYKLDSLPSELWSLTTLRKVCVQKPSNAMAAMVQKLEVNNGCEVI 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02615 893 PANTHER - 51 891 - -
Tsu02g02615 893 PANTHER DISEASE RESISTANCE PROTEIN RP 51 891 IPR044974 GO:0006952
Tsu02g02615 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 443 IPR027417 -
Tsu02g02615 893 Gene3D - 5 110 - -
Tsu02g02615 893 PRINTS Disease resistance protein signature 631 647 - -
Tsu02g02615 893 PRINTS Disease resistance protein signature 187 202 - -
Tsu02g02615 893 PRINTS Disease resistance protein signature 378 392 - -
Tsu02g02615 893 SUPERFAMILY L domain-like 507 870 - -
Tsu02g02615 893 Gene3D Ribonuclease Inhibitor 545 884 IPR032675 -
Tsu02g02615 893 MobiDBLite consensus disorder prediction 129 149 - -
Tsu02g02615 893 Pfam Rx N-terminal domain 5 85 IPR041118 -
Tsu02g02615 893 Gene3D - 429 518 IPR036388 -
Tsu02g02615 893 Gene3D - 147 336 IPR027417 -
Tsu02g02615 893 CDD RX-CC_like 2 123 IPR038005 -
Tsu02g02615 893 Pfam NB-ARC domain 171 429 IPR002182 GO:0043531
Tsu02g02615 893 Gene3D - 343 428 IPR042197 -
Tsu02g02615 893 Coils Coil 113 133 - -
Tsu02g02615 893 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02615 Tsu-Chr2 27304195 27306981 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02615 - - gmx:100814688 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02615 02 27304195 27306981 Tsu02g02615 02 27304195 27306981 ECH