Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02604 ATGGCTCGCTTAATTCTCTTTCTCATTTTTCTCACCTTCATTACATTATCTTTCCTCTCAGAGGTTCAATCAGCATCGTTCAAGATTGTGAATAGGTGCCGTTACACTATATGGCCAGGATTACTCTCCGGCGCCACTTCGCCGCCGCTACCAACCACCGGATTCACCCTCAAGAGTGGAAAATCAAGGACTATACAAATTCCGAGATCTTGGTCGGGTCGGTTATGGGCGCGGACACTCTGCGGCCAAGACTCCGACGGAAAATTCTCCTGTGTAACCGCCGACTGTGGTTCCGGCAAAGTTTCTTGCGCCGGAGGAGGTGCCAAACCTCCGGCAACATTGGCGGAGTTCACATTAAACGGAGCTGACGGGTTGGATTTCTATGACGTGAGTTTAGTCGACGGTTATAATCTTCCGATGCTGATCGTGGCTCAAGGAGGGACTAGAGGTGGCTGCAGTGCAACCGGTTGTCTTGTGGATCTTAACGGCGGTTGTCCGACGGATCTTAAGGTGGCGCGTGGTAATGGGAGTGGTGGTAGTGTTGTTGCTTGTAGAAGCGCGTGTGAAGCTTTTGGGGATCCTCGTTATTGTTGTAGTGAGGCGTACTCTACGCCTGACACGTGTGGTCCTTCTGTTTACTCGTTGCTTTTTAAGCATGCTTGCCCACGCGCATATAGCTACGCGTATGATGATAAGACCAGTACCTACACATGTGCTTCTGCTAATTATTTGATCGTGTTTTGCCCTTTACCTTATACAAGCCAAAAGGTGTTGGGAGCAAGGAAAGATGGGGCACCACTTCCTCTTGTAAACACAACTATGATGTACTTCTCAAAACAGCATTCAGGCGGTTCTTCGTCAACAGGTCTGATCCAATCGCAGATTATAGCTTATGTTGCATCTATCGCTGTGGCATTTTTCCTGTCTTGCCCTCATAATTAA 942 0.4851 MARLILFLIFLTFITLSFLSEVQSASFKIVNRCRYTIWPGLLSGATSPPLPTTGFTLKSGKSRTIQIPRSWSGRLWARTLCGQDSDGKFSCVTADCGSGKVSCAGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAQGGTRGGCSATGCLVDLNGGCPTDLKVARGNGSGGSVVACRSACEAFGDPRYCCSEAYSTPDTCGPSVYSLLFKHACPRAYSYAYDDKTSTYTCASANYLIVFCPLPYTSQKVLGARKDGAPLPLVNTTMMYFSKQHSGGSSSTGLIQSQIIAYVASIAVAFFLSCPHN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02604 313 PANTHER OS03G0233200 PROTEIN 5 260 IPR001938 -
Tsu02g02604 313 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
Tsu02g02604 313 CDD TLP-PA 26 248 - -
Tsu02g02604 313 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Tsu02g02604 313 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Tsu02g02604 313 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Tsu02g02604 313 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Tsu02g02604 313 Pfam Thaumatin family 31 249 IPR001938 -
Tsu02g02604 313 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 5 260 - -
Tsu02g02604 313 Gene3D Thaumatin 25 249 IPR037176 -
Tsu02g02604 313 SMART tha2 27 249 IPR001938 -
Tsu02g02604 313 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Tsu02g02604 313 ProSiteProfiles Thaumatin family profile. 24 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02604 Tsu-Chr2 27150028 27154955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02604 6 249 Receptor kinase-like Gene Family AT5G38280 52.033 3.01e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02604 - - gmx:100802252 530.406