Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02603 ATGGATCTGTTAGCCTCAACTTATATCACTCTCATTACTCTTCTTTTCCTCACTCCCAAAGGTGTAACTAGTTCCACCTTCACATTTGTAAACAAATGTGATTACACAGTATGGCCAGGCATTCTAGCAAATGCCGGCAGCCCATCACTCGGAAGCACCGGTTTCGAACTTCCCCAACAAACAACCCGCTCATTTCAAGCTCCAGCCGGTTGGTCCGGTCGATTCTGGGCCCGAACCGGTTGCAACTTCGACGGATCTGGTACCGGTTCCTGTCTCACCGGAGACTGTGGCTCTAACATGATAGAATGCAACGGTGCCGGAGCTGCTCCTCCAGCAACACTCGCAGAGTTCACTCTTGGAACTCTAGGACAAGATTTCTACGACGTGAGTCTTGTCGATGGTTACAATTTACCGATGATTGTCGAAGGTTCAGGTGGGTCTGGTATGTGTGAATCAACTGGATGTACTTCCGATCTGAACCAACAATGTCCGGCGGAGTTGAGAGCTTCTGATGGAAGCGCGTGTAAAAGCGCGTGTGAGGCTTTTGGTAGTCCTGAGTATTGTTGCAGTGGCGCGTATGGTTCACCGGATACTTGTAAGCCTTCTATTTACTCTCAGATGTTTAAAGCTGCTTGTCCTAGATCGTATAGCTACGCATACGATGATGCTACGAGTACTTTTACATGTACTGCTGCGGATTATACCGTTACGTTTTGTCCATCTTCTCCAAGtAAAAAATCATCACAATATCCAACAACACCAATGACCTCAACAACGTTACCAGGGACTTCAACAGCGTTACCAGGAACAGGGACAGCGACAGGGAATCCTGTGATTGGAACAGGGTCCGAAGGGGGATCAGTGGAATACACGGGTACCGACACACCCATTGGGTATTCGGTTCCTGTTAATTCAGGGTCAGGATCAAGTGGAGGAGAGACCATGCTAGCAGATGGGTCATATTTAGCTGGATTAGCCATGGGAGACTCATCTACAACAGCTTCATCTTCGTTTCTCTACTCTTTTGGCCTTTTGCTTATTCTCTTAATGCTTTAG 1056 0.4754 MDLLASTYITLITLLFLTPKGVTSSTFTFVNKCDYTVWPGILANAGSPSLGSTGFELPQQTTRSFQAPAGWSGRFWARTGCNFDGSGTGSCLTGDCGSNMIECNGAGAAPPATLAEFTLGTLGQDFYDVSLVDGYNLPMIVEGSGGSGMCESTGCTSDLNQQCPAELRASDGSACKSACEAFGSPEYCCSGAYGSPDTCKPSIYSQMFKAACPRSYSYAYDDATSTFTCTAADYTVTFCPSSPSKKSSQYPTTPMTSTTLPGTSTALPGTGTATGNPVIGTGSEGGSVEYTGTDTPIGYSVPVNSGSGSSGGETMLADGSYLAGLAMGDSSTTASSSFLYSFGLLLILLML 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02603 351 PANTHER OS03G0233200 PROTEIN 9 265 IPR001938 -
Tsu02g02603 351 Pfam Thaumatin family 31 240 IPR001938 -
Tsu02g02603 351 Gene3D Thaumatin 25 240 IPR037176 -
Tsu02g02603 351 SMART tha2 27 240 IPR001938 -
Tsu02g02603 351 ProSiteProfiles Thaumatin family profile. 24 240 IPR001938 -
Tsu02g02603 351 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 9 265 - -
Tsu02g02603 351 MobiDBLite consensus disorder prediction 243 277 - -
Tsu02g02603 351 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Tsu02g02603 351 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Tsu02g02603 351 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Tsu02g02603 351 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Tsu02g02603 351 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Tsu02g02603 351 SUPERFAMILY Osmotin, thaumatin-like protein 26 241 IPR037176 -
Tsu02g02603 351 CDD TLP-PA 26 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02603 Tsu-Chr2 27104876 27107597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02603 6 248 Receptor kinase-like Gene Family AT5G38280 47.104 7.24e-75 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02603 - - cam:101493007 548.895