Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02596 ATGGATGATCCTAACAACAAAGGCAATTCATCTCCATACgactcttcatcttcttcttctttattatCACAACCTTTCTTATCAAAACCCTCCTcaatcacaacaacaacataccCACCACCAATAGAACAAGACCATGATTATTCAAACCAAGAAGAATCTGACTCAAATCAACAATACATTCACATCTCATACAATCATGGTCCTCGTTATTTCAAAGACCTGCCTTTTCTCatcctttttcttctctttgttcTCTCCACTTTCGCTTTTGGAATCTTCTCAATTTTCCATAGAAACATCAATTACTCAACACTCTCTTCTTACACCTATGACACAAACACCACTTCTTGCATCAACCCTTCACTTTCACTTTCATCAACTTTTCCCATCAATTTTCTCTCTTCATCTTCACCTTTTATCAAAGATTTAACATGGACACTTGTTATTACCTTCGTTTTAAGCCTACCCATGTGTTGGTCTTTGCTTCTTTTACTCAAGCATTACACCAAACACCTTGTCTACGCTTCTCTTCCTTTATTTATTCTAATTCCTATCTTCctaaatgtttattggtttgtTGCTTGCACTATTAAAACTTCTTGTAGTGATGCTTTTCCTATGGTGTATAGAATTATAgtgttggtttttgtttttttggttattgGAGTTATTGTGTGGATTCTTGTTTTGAATTGGCACCGTGTGGAACTCACTGTGAGTATAATTGGGGTTGCTTCTGATGCACTTTCTTGGAATATGGGTTTGTTTGGGGTGCTTCCTTGTTTGACTATTGGGCTTGTTGTGTATTATGTGCCTATTGTGGTTTTTTTGGTGTTTGCTAAGTATAATGGGAAGGTTGTGCCTAAGAAATTGCATAGTGAATATGATTGTGTTTGGAAGGAGGATTCTTGGGTTCCAGCTTATTTTGCATTGGCAATACTTACTATGTTGTGGTCGGCGGCAGCTATGCTCGAAGCTCAGGTTTATGTCATTAGTGGAACTATTGCTCGTTGGTATTTCTCCAAGGATTTTGAGACTCCTACAAAGAGTATTAGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGAACAATATGTTTGTCGGGATTGCTTATCTTTGTTGTTCGATTAGTGCGTTCTGTCGTTGATAATGCAAGACAAGAAGGTGCTCCAGGGCTAGTGAACATTGTATTGCGGTGCTGTGTAAATGCCTTACTGACAGCTGTTGATTTTCTTAACAAGTTTACTATCAACTTTGCTGCAATAACCGGTGAAGCTTACTGTGTATCTTCAAGGATGACATATGAACTTCTAAGACGTAACCTTCTCTCTGCTGTTTTTGTGGAGACAATATCATCTCGCCTTCTGGTTGGaattgtttttgtcctgtcagCAATTTACACAATTGTGGCCTGTGTTATCTTAAAAGCTGCGACCAATCTCGGGTCTGATGCATATTTTGTAGCAGCGATAGCATGGCTTCTACTGATAATAGTGCTGGGTTACCTTGTCCATGTGCTCGACAATGTAATTGACACAATTTATGTCTGCTATGCCATAGACAGGGACAGAGGAGAGGTTTGTAAACAAGACGTTCATGAAGTTTATGTTCACCTACCCATAAGTAGAAGTCTTAGACAATCTAATATTACAAGAACTCTAGGTGTATAA 1677 0.3566 MDDPNNKGNSSPYDSSSSSSLLSQPFLSKPSSITTTTYPPPIEQDHDYSNQEESDSNQQYIHISYNHGPRYFKDLPFLILFLLFVLSTFAFGIFSIFHRNINYSTLSSYTYDTNTTSCINPSLSLSSTFPINFLSSSSPFIKDLTWTLVITFVLSLPMCWSLLLLLKHYTKHLVYASLPLFILIPIFLNVYWFVACTIKTSCSDAFPMVYRIIVLVFVFLVIGVIVWILVLNWHRVELTVSIIGVASDALSWNMGLFGVLPCLTIGLVVYYVPIVVFLVFAKYNGKVVPKKLHSEYDCVWKEDSWVPAYFALAILTMLWSAAAMLEAQVYVISGTIARWYFSKDFETPTKSIRTSLRNAFGPSSGTICLSGLLIFVVRLVRSVVDNARQEGAPGLVNIVLRCCVNALLTAVDFLNKFTINFAAITGEAYCVSSRMTYELLRRNLLSAVFVETISSRLLVGIVFVLSAIYTIVACVILKAATNLGSDAYFVAAIAWLLLIIVLGYLVHVLDNVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSNITRTLGV 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02596 558 Pfam Plasma-membrane choline transporter 217 525 IPR007603 GO:0022857|GO:0055085
Tsu02g02596 558 MobiDBLite consensus disorder prediction 1 44 - -
Tsu02g02596 558 PANTHER CTL-LIKE PROTEIN DDB_G0288717 59 539 - -
Tsu02g02596 558 MobiDBLite consensus disorder prediction 1 53 - -
Tsu02g02596 558 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 59 539 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02596 - - gmx:100810591 759.599