Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02577 atgatgttaattaataataatatgtctTCAACTCTCAAACTTTTTTGTATTACCTTTCTTTCCATCATCTGCATTGTTTGTAATGCCGATCATCATGCTTCTGCTGGCCCTCATGGAGGCGCGAAAGTCATCACTTACGATGGTCGATCACTCATGATCAATGGAAGACGAGAACTTTTCTTCTCTGGTTCCATCCATTATCCACGAAGCACACCAGAAATGTGGCCGGATATTCTTGAAAAGGCAAGACATGGAGGATTAAACTTGATCCAAACGTACGTGTTTTGGAACGCTCATGAGGCCGAAAAAGgcaagTTAGTTTGGGAAGACAGGTATGACATCATAAAGTTCATTAAACTTGTACAAGAGAAAGGAATGTATGTTACCCTTAGAGTTGGTCCTTTCATCCAAGCTGAATGGAATCATGGAGGACTTCCATATTGGCTAAGAGAGGTTCCTGACATCATTTTCCGATCTAACAATGAACCTTTCAAGAAACACATGAAAGAATATGTACAAACTGTTATTGATAAAATAAGAGATGAAAAACTCTTTGCTCCACAAGGAGGCCCTATCATCATGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGAAGCTGATGGAGATAATTATGTTCAATGGGCTGCAAAAATGGCAATTTCACTAAATGTCGGAGTTCCATGGGTCATGTGCAAGCAAAAGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCATTGTGGTGATACATTCACAGGTCCAAACAAACCATACAAACCAGCCATATGGACTGAAAACTGGACTGCTCAGTATAGAGTATTTGGAGATCCACCATCTCAAAGATCTGCAGAAGACATTGCCTTCTCAGTTGTTCGCTTCTTCTCTAAGAATGGATCTTTAGTCAACTACTACATGTATCATGGTGGAACAAATTTTGGTAGAACAAGCTCTGCCTTTACAACAACCCGTTATTACGATGAAGCTCCTCTTGATGAGTTTGGTTTGCAAAGAGAACCAAAATGGAGTCACTTGAGGGATGCACACAAATCTGTGAACTTGTGTAAGAGGGCTCTACTCAATACTGAACCTGTCGTACAAAAACTTAGCCAGTATCATGAGATTATAACCTTTGAAAAGCCAGGAGGTAATTTATGTGCTGCTTTCATCACTAACAACCACAccaaaacaccaaaaacaatACAATTCAGAGGTACAGACTATTATTTGCCACCACGCTCGATCAGCGTTCTTCCTGATTGCAAGACTGTGGTCTTCAACACTCAAAATATTGCTTCACAACACAATTCAAGAAACTTCGAGAAGTCAAAGCTTGCAAATAATTTCAAGTGGGAGGTGTTTCATGAGCCAATTCCAACTGCCAAGGATTTGCTACACAAACAAAAACTTCCTTCAGAACTTTACAGCTTGCTGAAGGACACCACTGATTATGGATGGTACACCACAAGTGTGGAGTTGGGTCCAGAAGACTTACCAAAGAAGAATGATGTATCACCCGTTCTTCGTATTCTGAGTCTTGGACATTCATTGCTTGCCTTTGTAAATGGACAATACATTGGATCTAATCATGGAAGCCATGAAGAGAAAGGTTTTGAATTTCAGAAGCCTGTAAGTTTCAAGGTTGGAGTTAACCAAATAGCTATCCTGGGTTGCTTAGTAGGACTACCTGATAGTGGAGCATACATGGAACACAGGTATGCCGGACCGAAGACTATAATCATCCTCGGTTTGAATTCTGGAACAATTGATCTCACTCGTAATGGTTGGGGTCACCAGATTGGTCTCAAAGGAGAGTTGCTTAGCATTTTCACTGAGGAGGGATCAAAGAAAGTAGAATGGAAAGAAGCCAAGGGACCTGCATCAACTCTCTCCTGGTACAAGACAAATTTTGCAACTCCAGAGGGAAGGGAACCAGTTGCTATTGGAATGGATGGTATGGGAAAAGGAATGGTTTGGGTCAATGGTGAAAGCATTGGTCGTCACTGGTTGAGCTACCTCTCTCCTCTTGGAAAGCCTACTCAGTCAGAGTACCACATTCCAAGATCTTTCCTTAAACCAAAAGACAACTTGCTTGTTATATTGGAGGAAGAGGCAGTAATGCCAGACAAGGTTGCCATCCTAAATGTGAATAGAGATACAATATGCAGTATAATCACAGAGAGTCACCCTCCCAATATTAAGGAATTCTCAAGTAAGAATAAATTACTCCAACCTACTTCGGGGAATCTGATTCCAGAAGCTATACTCAAGTGcccaaataaaaaaaccatttcTGCTGTTGAGTTTGCAAGTTTTGGTGATCCTACTGGTTTCTGTGGAGGATTTATTATGGGAAAATGCCATGCACCTACCACCAAGAAGATTGTTGAACAGCAATGCTTAGGAAAAGAAGGTTGTGCTGTTCCAATGAACAAAGCAGCATTCACCAATGGTAATGATGGATGCCCAAATGTGATGAAGACACTTGCAATCCAAGTTAAGTGTGGAAGGAATTAG 2532 0.4009 MMLINNNMSSTLKLFCITFLSIICIVCNADHHASAGPHGGAKVITYDGRSLMINGRRELFFSGSIHYPRSTPEMWPDILEKARHGGLNLIQTYVFWNAHEAEKGKLVWEDRYDIIKFIKLVQEKGMYVTLRVGPFIQAEWNHGGLPYWLREVPDIIFRSNNEPFKKHMKEYVQTVIDKIRDEKLFAPQGGPIIMAQIENEYNHIQLAYEADGDNYVQWAAKMAISLNVGVPWVMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPAIWTENWTAQYRVFGDPPSQRSAEDIAFSVVRFFSKNGSLVNYYMYHGGTNFGRTSSAFTTTRYYDEAPLDEFGLQREPKWSHLRDAHKSVNLCKRALLNTEPVVQKLSQYHEIITFEKPGGNLCAAFITNNHTKTPKTIQFRGTDYYLPPRSISVLPDCKTVVFNTQNIASQHNSRNFEKSKLANNFKWEVFHEPIPTAKDLLHKQKLPSELYSLLKDTTDYGWYTTSVELGPEDLPKKNDVSPVLRILSLGHSLLAFVNGQYIGSNHGSHEEKGFEFQKPVSFKVGVNQIAILGCLVGLPDSGAYMEHRYAGPKTIIILGLNSGTIDLTRNGWGHQIGLKGELLSIFTEEGSKKVEWKEAKGPASTLSWYKTNFATPEGREPVAIGMDGMGKGMVWVNGESIGRHWLSYLSPLGKPTQSEYHIPRSFLKPKDNLLVILEEEAVMPDKVAILNVNRDTICSIITESHPPNIKEFSSKNKLLQPTSGNLIPEAILKCPNKKTISAVEFASFGDPTGFCGGFIMGKCHAPTTKKIVEQQCLGKEGCAVPMNKAAFTNGNDGCPNVMKTLAIQVKCGRN 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02577 843 Gene3D - 607 731 - -
Tsu02g02577 843 Gene3D - 399 575 - -
Tsu02g02577 843 Gene3D - 757 843 IPR043159 -
Tsu02g02577 843 PANTHER BETA-GALACTOSIDASE RELATED 26 837 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 SUPERFAMILY Galactose-binding domain-like 420 580 IPR008979 -
Tsu02g02577 843 Pfam Glycosyl hydrolases family 35 50 356 IPR031330 -
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 268 283 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 130 149 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 305 320 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 660 676 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 75 93 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 633 647 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 187 202 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 54 71 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 PRINTS Glycosyl hydrolase family 35 signature 324 340 IPR001944 GO:0004553|GO:0005975
Tsu02g02577 843 Gene3D Glycosidases 41 360 - -
Tsu02g02577 843 Pfam Beta-sandwich domain in beta galactosidase 364 436 IPR041392 -
Tsu02g02577 843 ProSiteProfiles SUEL-type lectin domain profile. 757 841 IPR000922 GO:0030246
Tsu02g02577 843 SUPERFAMILY (Trans)glycosidases 43 360 IPR017853 -
Tsu02g02577 843 Pfam Galactose binding lectin domain 761 840 IPR000922 GO:0030246
Tsu02g02577 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 189 201 IPR019801 GO:0004553|GO:0005975
Tsu02g02577 843 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 26 837 - -
Tsu02g02577 843 SUPERFAMILY Galactose-binding domain-like 598 742 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02577 Tsu-Chr2 26572364 26577225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02577 44 843 Glycoside Hydrolase AT2G16730 60.572 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02577 - - gmx:102663614 1349.34