Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02543 ATGGGTTTCCGTTTACATGCTATTCTAAGGACATCATTAACAGCTAGACAAGCAACATCAAAATATGTAGAAGTGAGAAAGGGCTATGTAGCAGTGTATGTTGGAGAGAAACATAAGCGGTTTATAATCCCAGTATCATACTTGAACCAACCTTCATTTCAAGAATTGTTAAGTCAAGTTGAGGAAGAGTTTGGATATGATCATTCCATGGGTGGACTCACCATTCCTTGCACCGAAGACGTCTTCCAACATATAACTTCTTGCCTGAATGGGCTATGA 279 0.3943 MGFRLHAILRTSLTARQATSKYVEVRKGYVAVYVGEKHKRFIIPVSYLNQPSFQELLSQVEEEFGYDHSMGGLTIPCTEDVFQHITSCLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02543 92 PANTHER AUXIN-INDUCED PROTEIN 6B 2 90 - -
Tsu02g02543 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 90 IPR003676 GO:0009733
Tsu02g02543 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02543 Tsu-Chr2 26189297 26189575 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02543 14 91 Calmodulin-binding Proteins AT3G43120 44.872 3.70e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02543 K14488 - gmx:112997793 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02543 02 26189297 26189575 Tsu02g02543 02 26189297 26189575 ECH