Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02540 ATGGGTTTTCGTTTACCTAGTATCATCAGGTCAATGGCATTATCGTCAAAAGGTGTCCCAAAGGGATATCTAGCTGTGTatgtaggagagaaaatgaagagGTTTGTAATTCCTGTATCATACTTGAACCAAATCTCATTCCAAGACTTACTCAGCCAATCTGAAGAACAATTTGGATTTGACCATCCAATGGGTGGTATAACTATTCCTTGCAGAGAAGATGTTTTCTTAGAAATCACTTCAAGCTTGAATTGA 255 0.3451 MGFRLPSIIRSMALSSKGVPKGYLAVYVGEKMKRFVIPVSYLNQISFQDLLSQSEEQFGFDHPMGGITIPCREDVFLEITSSLN 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02540 84 PANTHER - 1 84 - -
Tsu02g02540 84 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Tsu02g02540 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02540 Tsu-Chr2 26185690 26185944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02540 19 76 Calmodulin-binding Proteins AT3G43120 53.448 3.09e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02540 K14488 - gmx:100782363 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02540 02 26185690 26185944 Tsu02g02540 02 26185690 26185944 ECH