Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02534 ATGGGTTTCCGTTTAACTAATGTTATTCGACGGACATCGTTAACTGCCAACCAAACAGCATCAAAATCTGCAGAAGTGAGAAAGGGCTACGTTGCCGTGTACGTTGGAGAGAAACAGAAGCGGTTTGTGATCCCAATATCATACTTGAACCAACCATCATTTCAAGACTTATTGAGTCAAACCGAGGAAGAGTTTGGATATGACCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAAGCCGTGTTTCAACACATAACCTCACGCTTGAATGAGCTATAA 282 0.4433 MGFRLTNVIRRTSLTANQTASKSAEVRKGYVAVYVGEKQKRFVIPISYLNQPSFQDLLSQTEEEFGYDHPMGGLTIPCTEAVFQHITSRLNEL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02534 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 91 IPR003676 GO:0009733
Tsu02g02534 93 PANTHER AUXIN-INDUCED PROTEIN 6B 6 91 - -
Tsu02g02534 93 Pfam Auxin responsive protein 11 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02534 Tsu-Chr2 26164204 26164485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02534 15 86 Calmodulin-binding Proteins AT3G43120 44.444 3.02e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02534 K14488 - gmx:100816803 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02534 02 26164204 26164485 Tsu02g02534 02 26164204 26164485 ECH