Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02532 ATGGGTTTTCGTTTACCTGGTATTATCAGATCAAGGGCAACATCTTCAAAAGGTGTGGATGTGCCTAAAGGATATCTAGCAGTATATGTTGGAGAAGAAATGAAGCGGTTTGTGATCCCCATATCATACTTGAACCAACCATTGTTTCAAGAATTGTTGAACCAATCTGAGGAACAATTTGAATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGAGAAGACGTGTTCTTAGATATCAGTTCTCGCTTGAGTAGGTGCTAA 267 0.397 MGFRLPGIIRSRATSSKGVDVPKGYLAVYVGEEMKRFVIPISYLNQPLFQELLNQSEEQFEYDHPMGGLTIPCREDVFLDISSRLSRC 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02532 88 Pfam Auxin responsive protein 14 83 IPR003676 GO:0009733
Tsu02g02532 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Tsu02g02532 88 PANTHER SMALL AUXIN-UP RNA-RELATED 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02532 Tsu-Chr2 26160841 26161107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02532 20 78 Calmodulin-binding Proteins AT3G43120 55.932 4.26e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02532 K14488 - gmx:100795597 139.428