Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02531 atggGTTTCCGTTTACAGTCTATTCTAAGGGCATCAGTAACTGCTAGACAAGCAGCATCAAAATCTACAGAAATTCCAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCAACCATTGTTTCAAGACTTGTTGAATCAAGCTGAGGAAGAGTTTGGATATGATCATCCCACAGGTGGCCTGACCATTCCTTGCGCAGAAGATGTCTTCCAACGTATAACTTCTAGTTTGAATGGGCTATAA 279 0.4086 MGFRLQSILRASVTARQAASKSTEIPKGYVAVYVGEKQKRFVVPISYLNQPLFQDLLNQAEEEFGYDHPTGGLTIPCAEDVFQRITSSLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02531 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Tsu02g02531 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Tsu02g02531 92 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02531 Tsu-Chr2 26159614 26160039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02531 14 83 Calmodulin-binding Proteins AT3G43120 47.143 9.93e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02531 K14488 - gmx:106798972 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02531 02 26159614 26160039 Tsu02g02531 02 26159614 26160039 ECH