Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02522 ATGGGTTTTCGTTTAACTGGTATCATCAAAAGGGCTGCAAACCAAACATCTTCAAAAGGCGTGGATGTGCCAAAGGGATATCTTGCAGTATATGTTGGAGAAAAAATGAAGCGTTTTGTGATCCCAATATCATACTTGAACCAACCATTGTTTCAAGAATTGTTGAATCAAGCTGAGGAACAATTCGGATATGACCATCCAACAGGTGGTCTCACAATTCCTTGCAGTGTAGAAGTTTTCTCAGATGTTACTTCCCACTTGAATTTGTGCTAA 273 0.3919 MGFRLTGIIKRAANQTSSKGVDVPKGYLAVYVGEKMKRFVIPISYLNQPLFQELLNQAEEQFGYDHPTGGLTIPCSVEVFSDVTSHLNLC 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02522 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 88 IPR003676 GO:0009733
Tsu02g02522 90 PANTHER SMALL AUXIN-UP RNA-RELATED 3 88 - -
Tsu02g02522 90 Pfam Auxin responsive protein 14 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02522 Tsu-Chr2 26126498 26126770 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02522 15 80 Calmodulin-binding Proteins AT3G43120 56.061 1.44e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02522 K14488 - gmx:100793401 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02522 02 26126498 26126770 Tsu02g02522 02 26126498 26126770 ECH