Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02515 ATGCCCAACACCTCATCTTCCAAAAAGAACAGTCAAGATCAGCCTCAATTCAGTGGTCCCATCCCTAAATCATCTCATCGAACCGAAATGGGCAAATCTGAAGACAGTAAAAAGAACTCGGGTAAGAAACTCAAAGATGTAGAAATAAGTGTTCCGATAGTGTATGGGAACATAGCATTTTGGCTTGGCAAAAAAGCTAGTGAGTATCAATCACATAAGTGGACTATATATGTTCGTGGAGCATCCAATGAAGACCTGGGGGTTATTATAAAGCGTGTTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCATGAGAGTTGTGGATGCACCTCCTTTTGAGTTGTCAGAGGCCGGATGGGGAGAATTTGAAATTGCTATCACACTTTATTTCCACAGTGATGTCTGTGACAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCTGAGGATGAAAATAGTTCCATGTCCACAAAGAAGCCTGTTGTTGTGGAACTTTATGATGAGATAGTTTTCCCCGATCCCACTGAAGCTTTTTTAGCTCGTGTGCAAAATCACCCAGCTGTGCACTTGCCACGATTACCTGCTGGGCTTACCTTGCCTCCTCCCATTCCCGTCGAAGATGCGAGTAAAAGGAGGAAAGGTGATACCAAAGATAATCCCTTCAGCCAATGGTTCCTGAATTTCTCAGAAGCAGATGAACTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTTCAAAACTCAAACGACAGATAAGTTTGATTGAAGGACAACATAAGCAGCTTAAATCTTCTTCTGACCAATAG 822 0.4197 MPNTSSSKKNSQDQPQFSGPIPKSSHRTEMGKSEDSKKNSGKKLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTIYVRGASNEDLGVIIKRVVFQLHSSFNNPMRVVDAPPFELSEAGWGEFEIAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVELYDEIVFPDPTEAFLARVQNHPAVHLPRLPAGLTLPPPIPVEDASKRRKGDTKDNPFSQWFLNFSEADELLQLAAARQQVQAHISKLKRQISLIEGQHKQLKSSSDQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02515 273 PANTHER YEATS DOMAIN 19 271 IPR005033 GO:0006355
Tsu02g02515 273 Coils Coil 236 270 - -
Tsu02g02515 273 CDD YEATS_TFIID14_like 49 180 - -
Tsu02g02515 273 Pfam YEATS family 71 150 IPR005033 GO:0006355
Tsu02g02515 273 MobiDBLite consensus disorder prediction 1 43 - -
Tsu02g02515 273 MobiDBLite consensus disorder prediction 27 43 - -
Tsu02g02515 273 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 19 271 - -
Tsu02g02515 273 Gene3D YEATS domain 44 196 IPR038704 -
Tsu02g02515 273 MobiDBLite consensus disorder prediction 1 23 - -
Tsu02g02515 273 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02515 Tsu-Chr2 26040083 26045027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02515 K11341 - gmx:100790602 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02515 02 26040083 26045027 Tsu02g02515 02 26040083 26045027 ECH