Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02512 ATGTCACCGTCATCATCTTCCACCGGAAACTCCAGCAAAATCCGCCGCATTGTCCGTCTCCGACAAATGCTTCTCCGATGGAGAAAGAAAGCACGATTAACAACAACAAACTACGATGTACCGGAAGGACACGTGGCGGTATGTGTTGGTCCTAGTATGAGAAGATTCGTTGTTCGTGCTAGTTACTTGAATCATCCGATCTTCAAGAAGCTTCTGATGCAAGCGGAGGAAGAGTATGGTTTTTGTAACAATGGACCGCTTGCGATTCCGTGTGATGAAGATTTGTTTGAAGAAGTTCTTCGGGTTATGGCCCGACCCGAACCTAGGTTTTCTACGCTTGAAGATTTTCAGAGACGTTGCCACGTGGATGTTAGAAGTAGTAGTAATAGTGGTTTTGATCAGTTTGTAGGTGAATCGAGGCCGTTGCTTCATGATGACCCGATTTGTTGA 450 0.4556 MSPSSSSTGNSSKIRRIVRLRQMLLRWRKKARLTTTNYDVPEGHVAVCVGPSMRRFVVRASYLNHPIFKKLLMQAEEEYGFCNNGPLAIPCDEDLFEEVLRVMARPEPRFSTLEDFQRRCHVDVRSSSNSGFDQFVGESRPLLHDDPIC 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02512 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 145 IPR003676 GO:0009733
Tsu02g02512 149 Pfam Auxin responsive protein 19 102 IPR003676 GO:0009733
Tsu02g02512 149 PANTHER SMALL AUXIN-UP RNA-RELATED 9 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02512 Tsu-Chr2 25967784 25968581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02512 9 143 Calmodulin-binding Proteins AT4G34750 50.676 4.05e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02512 K14488 - gmx:100795345 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02512 02 25967784 25968581 Tsu02g02512 02 25967784 25968581 ECH