Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02502 AtggctgaagaagaagaaacaacaaCTCTGAAATCTCTTGAAGATTTTGATCATCAAAAGAAGCCCAAAAGGAACAAATTTGCTTGTGCTTGTGCTATCTTGGCTTCTATGACTTCTATCCTACTTGGCTATGATATTGGTGTGATGAGTGGAGCAGCGCTCTATATACAAAGAGACCTTAAAGTAACAGATGTACAAATTGAAATCCTATTAGGCATCATAAACCTTTACTCTCCCATAGGTTCATATATTGCAGGGAGATTATCCGATTGGATTGGACGGCGTTACACAATTGTTCTTGCCGGTGTAATTTTCTTTGTCGGAGCTGTACTTATGGGACTTTCTCCAAACTATGCATTTCTGATGTTTGGCCGTTTCTTTGCCGGTGTTGGTATAGGTTTCGCCTTCTTGATTGCTCCTGTCTATACCTCTGAAGTCTCCCCAACTTCGTCTCGTGGCTTCCTCACTTCCTTGCCTGAGGTATTTCTAAATGGAGGGATTTTAATTGGATACATATCAAACTACGGATTTTCAAAGCTACCACTCCGCTATGGTTGGCGAGTGATGCTTGGAATTGGCGCAATCCCTTCTATATTCCTAGCTCTAGCCGTATTAGCCATGCCCGAGTCACCTAGGTGGCTCGTTGCGAAGGGTCGATTAGGGGAAGCCAAAAAGGTTCTATATAAAATATCTGATTCTAAAGAAGAGGCTCAACAAAGACTAGCCGATATTAAAGAGATAGCAGGGATCCCTTTGGACTGCGATGACGACATTGTTTCTGTCACAAAAGTTCAAGGCAAAGGTGTATGGAAAGAACTATTTCTTTATCCTACACCTGCAGTTCGTCACATTTTCATTGCTTCCCTTGGGATTCACTTCTTCGCACAAGCCACAGGCATAGATGCTGTTGTTTTGTACAGTCCTAGAATCTTCGAGAAGGCTGGGATAAAATCCGACACACATAAGCTTCTCGCAACCATAGCCGTCGGGTTTGTGAAAACAATGTTCGTCTTAGTGGCCACTTTTTTATTGGATCGTGTTGGGAGGCGCGCATTGTTGTTAACCAGTGTTGGTGGGTTAATACTCTCGCTTCTGACATTGGCGATTAGTCTcactattattaataattcaCATGCCAGCCTGACATGGGCTATTGGCCTTAGTATAGCGGCGGTGTTGTCCTTCGTGGGTACTTTCTCAATAGGGTCGGGTCCCATTACATGGGTTTATAGTTCAGAGATATTTCCGTTGAGGCTTCGAGCTCAGGGCGTGTCTATTGGAGCTGTGGTGAATCGGGTCACTAGCGGAGTCATCTCCATGACTTTTTTGTCCCTTTCTAAGGCCATCACCATAGGTGGTGCTTTCTTTCTTTTCGCAGGGATTGCAATTGTTGCATGGGTCTTTCACTATACTATGCTCCCTGAAACACAAGGCAAAACATTGGAAGAAATAGAAGGGTCTTTCGGTAATTTCTGGAGGAAACCGAACTCCAATGCCACCAAAGGAGTGAACCATGAAATTCAATTGACTGCCAATGATTAG 1542 0.4274 MAEEEETTTLKSLEDFDHQKKPKRNKFACACAILASMTSILLGYDIGVMSGAALYIQRDLKVTDVQIEILLGIINLYSPIGSYIAGRLSDWIGRRYTIVLAGVIFFVGAVLMGLSPNYAFLMFGRFFAGVGIGFAFLIAPVYTSEVSPTSSRGFLTSLPEVFLNGGILIGYISNYGFSKLPLRYGWRVMLGIGAIPSIFLALAVLAMPESPRWLVAKGRLGEAKKVLYKISDSKEEAQQRLADIKEIAGIPLDCDDDIVSVTKVQGKGVWKELFLYPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDTHKLLATIAVGFVKTMFVLVATFLLDRVGRRALLLTSVGGLILSLLTLAISLTIINNSHASLTWAIGLSIAAVLSFVGTFSIGSGPITWVYSSEIFPLRLRAQGVSIGAVVNRVTSGVISMTFLSLSKAITIGGAFFLFAGIAIVAWVFHYTMLPETQGKTLEEIEGSFGNFWRKPNSNATKGVNHEIQLTAND 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02502 513 SUPERFAMILY MFS general substrate transporter 17 485 IPR036259 -
Tsu02g02502 513 CDD MFS_PLT 34 484 IPR044776 GO:0005351
Tsu02g02502 513 Gene3D MFS general substrate transporter like domains 21 490 IPR036259 -
Tsu02g02502 513 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02502 513 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02502 513 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02502 513 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02502 513 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02502 513 Pfam Sugar (and other) transporter 31 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu02g02502 513 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g02502 513 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 14 505 - -
Tsu02g02502 513 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 505 IPR045262 GO:0015144
Tsu02g02502 513 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02502 513 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 477 IPR020846 GO:0022857
Tsu02g02502 513 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02502 Tsu-Chr2 25751659 25760255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02502 20 512 Organic Solute Cotransporters AT3G18830 67.864 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02502 - - gmx:100816478 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02502 02 25751659 25760255 Tsu02g02502 02 25751659 25760255 ECH