Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02498 ATGGCTTCTGCATCAGCATCTCTTTTCAAGTCATCACTTGTTCTTGACAAGTCTGAATGGGTGAAAGGACAAAGCCTCCGTCAACCTATGTCCGTTGTCAGATGCAATCCCGCCACTCCATCAAGTCTCACCATCAGAGCTGGTGCTTATACTGATGAGCTCGTCAAGACCGCGAAAACAATTGCTTCACCAGGGCGTGGTATTCTGGCCATGGATGAGTCCAATGCTACATGCGGCAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGTCAAGCATGGCGTACCCTTCTGGTGACAGTTCCCTCACTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCTACAATAGATGGAAGGAAGATTGTCGATGTGCTTGTCGAGCAAAACATTGTTCCTGGTATCAAAGTCGACAAGGGTCTGGTGCCCCTTGCTGGTTCCAATGACGAGTCATGGTGCCAAGGTCTAGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAACAAGGTGCTCGTTTCGCAAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCCGTCAAGGAAGCAGCTTGGGGTTTGGCTCGCTATGCTGCAATTAGTCAGGACAACGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGCGAACATAACATTGACAGGACCTTTGAAGTAGCCCAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCCGGAAATGAGTCCAAGGAAAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAACTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGAAATGAACAAATCTCCAAACCCATGGCACGTGTCGTTTTCATATGCAAGAGCTCTCCAAAATACCGCATTGAAGACATGGGGAGGCCGCGTAGAGAACGTGAAGGCAGCACAAGATGCGCTTCTTTTCCGCGCTAAGTCCAACTCACTTGCTCAACTTGGAAAGTACACTGGTGATGGTGAATCTGAGGAAGCTAAGAAGGAACTATTTGTCAAAGGCTACTCCTATTAA 1194 0.4858 MASASASLFKSSLVLDKSEWVKGQSLRQPMSVVRCNPATPSSLTIRAGAYTDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPSLGEYISGAILFEETLYQSTIDGRKIVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHNIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGNESKEKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNEMNKSPNPWHVSFSYARALQNTALKTWGGRVENVKAAQDALLFRAKSNSLAQLGKYTGDGESEEAKKELFVKGYSY 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02498 397 SUPERFAMILY Aldolase 43 397 - -
Tsu02g02498 397 CDD FBP_aldolase_I_a 52 377 - -
Tsu02g02498 397 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 258 268 IPR029768 -
Tsu02g02498 397 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 25 397 IPR000741 GO:0004332|GO:0006096
Tsu02g02498 397 Pfam Fructose-bisphosphate aldolase class-I 53 397 IPR000741 GO:0004332|GO:0006096
Tsu02g02498 397 Gene3D Aldolase class I 33 396 IPR013785 -
Tsu02g02498 397 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 25 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02498 Tsu-Chr2 25641850 25645011 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02498 50 397 Miscellaneous Gene Families AT3G52930 55.398 7.03e-133 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02498 K01623 - gmx:100818915 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02498 02 25641850 25645011 Tsu02g02498 02 25641850 25645011 ECH