Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02496 ATGGCTTCTGCTTCAGCTTCTGTTTTCAAatcatcatcacttgttcttgACAAGTCTGAATGGGTCAAGGGACAAACAATCCGTCAACCTATGTCTGTTGTGAGATGCAACCCGACCGCGCCACCAAGTCTCACCATTAGAGCTGGTGCCTATACCGATGAACTCGTCAAGACCGCGAAAACAATTGCTTCACCAGGACGTGGTATTTTGGCCATGGATGAATCTAATGCTACTTGTGGGAAGCGTTTGGCGTCAATTGGGCTAGAGAACACCGAAGCTAACCGTCAAGCATGGCGTACCCTTCTGGTGACAGTTCCAACACTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACTTTATACCAATCCACAGTTGATGGAAGGAAGATTGTCGATGTGCTTGTTGAGCAAAACATTGTTCCCGGTATTAAAGTCGACAAGGGTCTGGTGCCTCTAGCTGGTTCCAACGATGAGTCATGGTGCCAAGGTCTTGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCTGTCAAGGAAGCAGCCTGGGGTTTGGCTCGCTATGCTGCAATTAGTCAGGACAACGGGTTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATAACATTGACAGGACCTTTGAAGTAGCCCAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTTCAATTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCCGGAAACGAGTCCAAGGAAAAGGTCTCTCCTGCAACAGTTGCTGACTATACCCTCAAACTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGAAATGAACAAATCTCCAAACCCATGGCACGTGTCGTTTTCATATGCAAGAGCTCTCCAAAATACCGCATTGAAGACATGGGGAGGCCGCGTAGAGAACGTGAAGGCAGCACAAGATGCGCTTCTTTTCCGCGCTAAGTCCAACTCACTTGCTCAACTTGGAAAGTACACTGGTGTTGGTGAATCTGAGGAAGCCAAGAAGGAACTATTTGTGAAAGGCTACTCTTACTAA 1197 0.4745 MASASASVFKSSSLVLDKSEWVKGQTIRQPMSVVRCNPTAPPSLTIRAGAYTDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHNIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGNESKEKVSPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNEMNKSPNPWHVSFSYARALQNTALKTWGGRVENVKAAQDALLFRAKSNSLAQLGKYTGVGESEEAKKELFVKGYSY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02496 398 CDD FBP_aldolase_I_a 53 378 - -
Tsu02g02496 398 Gene3D Aldolase class I 36 397 IPR013785 -
Tsu02g02496 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
Tsu02g02496 398 SUPERFAMILY Aldolase 44 398 - -
Tsu02g02496 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
Tsu02g02496 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 26 398 IPR000741 GO:0004332|GO:0006096
Tsu02g02496 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 26 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02496 Tsu-Chr2 25635317 25637983 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02496 51 398 Miscellaneous Gene Families AT3G52930 55.398 7.59e-132 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02496 K01623 - gmx:100818383 719.153